Difference between revisions of "RXN-10661"

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(Created page with "Category:Gene == Gene Tiso_gene_18996 == * left end position: ** 1415 * transcription direction: ** POSITIVE * right end position: ** 2659 * centisome position: ** 53.0161...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPSYN-RXN TRYPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tryptophan_synthase_(al...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18996 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPSYN-RXN TRYPSYN-RXN] ==
−
* left end position:
+
* direction:
−
** 1415
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** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
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** tryptophan_synthase_(alpha_beta_chains)
−
* right end position:
+
* ec number:
−
** 2659
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** [http://enzyme.expasy.org/EC/4.2.1.20 EC-4.2.1.20]
−
* centisome position:
+
−
** 53.01611   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
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== Reaction Formula ==
−
* [[RXN-11696]]
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* With identifiers:
−
** in-silico_annotation
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** 1 [[INDOLE-3-GLYCEROL-P]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
−
***ec-number
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* With common name(s):
−
== Pathways associated ==
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** 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] '''+''' 1 L-serine[c] '''=>''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 L-tryptophan[c] '''+''' 1 H2O[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_17207]]
 +
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4604]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1415}}
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* RHEA:
−
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10532 10532]
−
{{#set: right end position=2659}}
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* LIGAND-RXN:
−
{{#set: centisome position=53.01611    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02722 R02722]
−
{{#set: reaction associated=RXN-11696}}
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* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P11081 P11081]
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** [http://www.uniprot.org/uniprot/P14671 P14671]
 +
** [http://www.uniprot.org/uniprot/P13228 P13228]
 +
** [http://www.uniprot.org/uniprot/P18284 P18284]
 +
** [http://www.uniprot.org/uniprot/P43759 P43759]
 +
** [http://www.uniprot.org/uniprot/O84172 O84172]
 +
** [http://www.uniprot.org/uniprot/P11080 P11080]
 +
** [http://www.uniprot.org/uniprot/P16608 P16608]
 +
** [http://www.uniprot.org/uniprot/P18285 P18285]
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** [http://www.uniprot.org/uniprot/P16706 P16706]
 +
** [http://www.uniprot.org/uniprot/P12290 P12290]
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** [http://www.uniprot.org/uniprot/P42391 P42391]
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** [http://www.uniprot.org/uniprot/Q9PIF2 Q9PIF2]
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** [http://www.uniprot.org/uniprot/P12291 P12291]
 +
** [http://www.uniprot.org/uniprot/P42389 P42389]
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** [http://www.uniprot.org/uniprot/Q60179 Q60179]
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** [http://www.uniprot.org/uniprot/Q9PIF1 Q9PIF1]
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** [http://www.uniprot.org/uniprot/P07600 P07600]
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** [http://www.uniprot.org/uniprot/P07601 P07601]
 +
** [http://www.uniprot.org/uniprot/P06561 P06561]
 +
** [http://www.uniprot.org/uniprot/P56142 P56142]
 +
** [http://www.uniprot.org/uniprot/P06562 P06562]
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** [http://www.uniprot.org/uniprot/O27696 O27696]
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** [http://www.uniprot.org/uniprot/O28672 O28672]
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** [http://www.uniprot.org/uniprot/O66923 O66923]
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** [http://www.uniprot.org/uniprot/Q9JVC0 Q9JVC0]
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** [http://www.uniprot.org/uniprot/P43760 P43760]
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** [http://www.uniprot.org/uniprot/P34817 P34817]
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** [http://www.uniprot.org/uniprot/P34816 P34816]
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** [http://www.uniprot.org/uniprot/P17167 P17167]
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** [http://www.uniprot.org/uniprot/P17166 P17166]
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** [http://www.uniprot.org/uniprot/P19868 P19868]
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** [http://www.uniprot.org/uniprot/P19867 P19867]
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** [http://www.uniprot.org/uniprot/P16578 P16578]
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** [http://www.uniprot.org/uniprot/P43283 P43283]
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** [http://www.uniprot.org/uniprot/P43284 P43284]
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** [http://www.uniprot.org/uniprot/Q57011 Q57011]
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** [http://www.uniprot.org/uniprot/P31204 P31204]
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** [http://www.uniprot.org/uniprot/Q01998 Q01998]
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** [http://www.uniprot.org/uniprot/Q01997 Q01997]
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** [http://www.uniprot.org/uniprot/P34793 P34793]
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** [http://www.uniprot.org/uniprot/P42390 P42390]
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** [http://www.uniprot.org/uniprot/P50909 P50909]
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** [http://www.uniprot.org/uniprot/Q42529 Q42529]
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** [http://www.uniprot.org/uniprot/P51382 P51382]
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** [http://www.uniprot.org/uniprot/P77960 P77960]
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** [http://www.uniprot.org/uniprot/Q59992 Q59992]
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** [http://www.uniprot.org/uniprot/O22765 O22765]
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** [http://www.uniprot.org/uniprot/O04225 O04225]
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** [http://www.uniprot.org/uniprot/P25269 P25269]
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** [http://www.uniprot.org/uniprot/O64991 O64991]
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** [http://www.uniprot.org/uniprot/O05625 O05625]
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** [http://www.uniprot.org/uniprot/O13831 O13831]
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** [http://www.uniprot.org/uniprot/Q9YGB0 Q9YGB0]
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** [http://www.uniprot.org/uniprot/Q9YGA9 Q9YGA9]
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** [http://www.uniprot.org/uniprot/Q9X7C8 Q9X7C8]
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** [http://www.uniprot.org/uniprot/P00931 P00931]
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** [http://www.uniprot.org/uniprot/P00929 P00929]
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** [http://www.uniprot.org/uniprot/P0A2K1 P0A2K1]
 +
** [http://www.uniprot.org/uniprot/P0A877 P0A877]
 +
** [http://www.uniprot.org/uniprot/P0A879 P0A879]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=tryptophan_synthase_(alpha_beta_chains)}}
 +
{{#set: ec number=EC-4.2.1.20}}
 +
{{#set: gene associated=Tiso_gene_17207|Tiso_gene_4604}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:39, 10 January 2018

Reaction TRYPSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tryptophan_synthase_(alpha_beta_chains)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] + 1 L-serine[c] => 1 D-glyceraldehyde 3-phosphate[c] + 1 L-tryptophan[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10661&oldid=9929"