Difference between revisions of "PWY-6012-1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.165-RXN 2.3.1.165-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase...")
 
(Created page with "Category:Gene == Gene Tiso_gene_865 == * left end position: ** 3095 * transcription direction: ** NEGATIVE * right end position: ** 7455 * centisome position: ** 11.072157...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.165-RXN 2.3.1.165-RXN] ==
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== Gene Tiso_gene_865 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3095
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* common name:
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* transcription direction:
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** polyketide_synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.165 EC-2.3.1.165]
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** 7455
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* centisome position:
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** 11.072157   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''+''' 3 [[MALONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CPD-637]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 NADPH[c] '''+''' 3 H+[c] '''+''' 3 malonyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 6-methylsalicylate[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 3 CO2[c] '''+''' 4 coenzyme A[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7490]], patulin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7490 PWY-7490]
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** '''1''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3095}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12240 12240]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7455}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07253 R07253]
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{{#set: centisome position=11.072157    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN}}
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{{#set: common name=polyketide_synthase}}
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{{#set: ec number=EC-2.3.1.165}}
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{{#set: gene associated=Tiso_gene_136|Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_135}}
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{{#set: in pathway=PWY-7490}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:40, 10 January 2018

Gene Tiso_gene_865

  • left end position:
    • 3095
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7455
  • centisome position:
    • 11.072157
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6012-1&oldid=14047"