Difference between revisions of "Tiso gene 8563"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLN GLN] == * smiles: ** C(=O)(N)CCC([N+])C([O-])=O * inchi key: ** InChIKey=ZDXPYRJPNDTMRX-VKH...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLN GLN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C(=O)(N)CCC([N+])C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZDXPYRJPNDTMRX-VKHMYHEASA-N
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* common name:
 
* common name:
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** L-glutamine
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** endoribonuclease_l-psp_domain-containing_protein
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* molecular weight:
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* ec number:
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** 146.146   
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** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14]
 
* Synonym(s):
 
* Synonym(s):
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** Q
 
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** proglumide
 
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** glum
 
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** gln
 
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** glutamine
 
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** glumin
 
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** 2-aminoglutaramic acid
 
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** glutamic acid 5-amide
 
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** L-gln
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[CARBPSYN-RXN]]
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* With identifiers:
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* [[RME144]]
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** 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[AMP]][c]
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* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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* With common name(s):
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* [[TRANS-RXN-233]]
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** 1 ATP[c] '''+''' 1 a diphthine-[translation elongation factor 2][c] '''+''' 1 ammonium[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 a diphthamide-[translation elongation factor 2][c] '''+''' 1 AMP[c]
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* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
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* [[GMP-SYN-GLUT-RXN]]
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== Genes associated with this reaction  ==
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* [[GLUTAMATESYN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CTPSYN-RXN]]
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* [[Tiso_gene_3764]]
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* [[GLUTAMIDOTRANS-RXN]]
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** IN-SILICO_ANNOTATION
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* [[6.3.5.6-RXN]]
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***EC-NUMBER
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* [[6.3.5.7-RXN]]
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== Pathways  ==
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* [[GLUTAMIN-RXN]]
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* [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482]
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[ASNSYNB-RXN]]
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* [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546]
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* [[FGAMSYN-RXN]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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== Reconstruction information  ==
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* [[GLUTAMINESYN-RXN]]
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* [[annotation]]:
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* [[TRANS-RXN-233]]
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** [[pathwaytools]]:
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== Reaction(s) of unknown directionality ==
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*** [[in-silico_annotation]]
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* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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* [[PABASYN-RXN]]
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* [[PRPPAMIDOTRANS-RXN]]
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* [[ANTHRANSYN-RXN]]
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== External links  ==
 
== External links  ==
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* CAS : 56-85-9
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* RHEA:
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* METABOLIGHTS : MTBLC58359
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19753 19753]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992086 6992086]
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** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
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* HMDB : HMDB00641
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=endoribonuclease_l-psp_domain-containing_protein}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00064 C00064]
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{{#set: ec number=EC-6.3.1.14}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_3764}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58359 58359]
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{{#set: in pathway=PWY-6482|PWY-7546}}
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* BIGG : gln__L
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C(=O)(N)CCC([N+])C([O-])=O}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=ZDXPYRJPNDTMRX-VKHMYHEASA-N}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: common name=L-glutamine}}
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{{#set: molecular weight=146.146    }}
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{{#set: common name=Q|proglumide|glum|gln|glutamine|glumin|2-aminoglutaramic acid|glutamic acid 5-amide|L-gln}}
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{{#set: consumed by=CARBPSYN-RXN|RME144|GLUTAMINE--TRNA-LIGASE-RXN|TRANS-RXN-233|GLUTAMATE-SYNTHASE-NADH-RXN|GMP-SYN-GLUT-RXN|GLUTAMATESYN-RXN|CTPSYN-RXN|GLUTAMIDOTRANS-RXN|6.3.5.6-RXN|6.3.5.7-RXN|GLUTAMIN-RXN|GLUTAMATE-SYNTHASE-FERREDOXIN-RXN|ASNSYNB-RXN|FGAMSYN-RXN}}
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{{#set: produced by=GLUTAMINESYN-RXN|TRANS-RXN-233}}
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{{#set: consumed or produced by=L-GLN-FRUCT-6-P-AMINOTRANS-RXN|PABASYN-RXN|PRPPAMIDOTRANS-RXN|ANTHRANSYN-RXN}}
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Revision as of 17:40, 10 January 2018

Reaction DIPHTINE--AMMONIA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • endoribonuclease_l-psp_domain-containing_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a diphthine-[translation elongation factor 2][c] + 1 ammonium[c] => 1 H+[c] + 1 diphosphate[c] + 1 a diphthamide-[translation elongation factor 2][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6482, diphthamide biosynthesis (archaea): PWY-6482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7546, diphthamide biosynthesis (eukaryotes): PWY-7546
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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