Difference between revisions of "RXN-16076"

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(Created page with "Category:Gene == Gene Tiso_gene_8798 == * left end position: ** 4068 * transcription direction: ** NEGATIVE * right end position: ** 7301 * centisome position: ** 41.22416...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_8798 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] ==
* left end position:
+
* direction:
** 4068
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/6.3.4.18 EC-6.3.4.18]
* right end position:
+
** 7301
+
* centisome position:
+
** 41.22416   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[HISTIDINE--TRNA-LIGASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''=>''' 1 [[CPD0-181]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[ADP]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
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** 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''=>''' 1 N5-carboxyaminoimidazole ribonucleotide[c] '''+''' 1 phosphate[c] '''+''' 2 H+[c] '''+''' 1 ADP[c]
***ec-number
+
 
== Pathways associated ==
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== Genes associated with this reaction  ==
* [[TRNA-CHARGING-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_16011]]
 +
** [[pantograph]]-[[synechocystis]]
 +
== Pathways ==
 +
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[synechocystis]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4068}}
+
* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19317 19317]
{{#set: right end position=7301}}
+
* LIGAND-RXN:
{{#set: centisome position=41.22416    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07404 R07404]
{{#set: reaction associated=HISTIDINE--TRNA-LIGASE-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: ec number=EC-6.3.4.18}}
 +
{{#set: gene associated=Tiso_gene_16011}}
 +
{{#set: in pathway=PWY-6123|PWY-7234}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=synechocystis}}

Revision as of 16:42, 10 January 2018

Reaction RXN0-742

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogencarbonate[c] + 1 ATP[c] + 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] => 1 N5-carboxyaminoimidazole ribonucleotide[c] + 1 phosphate[c] + 2 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links