Difference between revisions of "Tiso gene 13864"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DI-H-OROTATE DI-H-OROTATE] == * smiles: ** C1(C(=O)NC(=O)NC(C(=O)[O-])1) * inchi key: ** InChIK...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** selenophosphate_synthet...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DI-H-OROTATE DI-H-OROTATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
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* smiles:
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* direction:
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** C1(C(=O)NC(=O)NC(C(=O)[O-])1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UFIVEPVSAGBUSI-REOHCLBHSA-M
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* common name:
 
* common name:
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** (S)-dihydroorotate
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** selenophosphate_synthetase
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* molecular weight:
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* ec number:
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** 157.105   
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** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
 
* Synonym(s):
 
* Synonym(s):
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** dihydro-L-orotate
 
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** (S)-4,5-dihydroorotate
 
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** (S)-4,5-dihydroorotic acid
 
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** (S)-hydroorotic acid
 
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** (S)-di-H-orotate
 
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** L-dihydroorotate
 
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** 4,5-dihydro-L-orotate
 
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** L-4,5-dihydroorotate
 
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** (S)-4-pyrimidinecarboxylic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-6491]]
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* With identifiers:
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* [[RXN0-6554]]
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** 1 [[WATER]][c] '''+''' 1 [[SE-2]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[SEPO3]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c]
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* [[DIHYDROOROTATE-DEHYDROGENASE-RXN]]
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* With common name(s):
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* [[RXN-9929]]
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** 1 H2O[c] '''+''' 1 selenide[c] '''+''' 1 ATP[c] '''=>''' 1 selenophosphate[c] '''+''' 1 phosphate[c] '''+''' 1 AMP[c]
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== Reaction(s) known to produce the compound ==
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* [[RXN0-6490]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[DIHYDROOROT-RXN]]
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* [[Tiso_gene_5669]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14608]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5668]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 5988-19-2
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* RHEA:
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* CAS : 155-54-4
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
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* METABOLIGHTS : MTBLC30864
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460289 5460289]
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* UNIPROT:
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* HMDB : HMDB00528
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** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00337 C00337]
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{{#set: common name=selenophosphate_synthetase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-2.7.9.3}}
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** [http://www.chemspider.com/Chemical-Structure.4573876.html 4573876]
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{{#set: gene associated=Tiso_gene_5669|Tiso_gene_14608|Tiso_gene_5668}}
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* CHEBI:
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{{#set: in pathway=PWY0-901|PWY-6281}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=30864 30864]
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{{#set: reconstruction category=orthology}}
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* BIGG : dhor__S
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=C1(C(=O)NC(=O)NC(C(=O)[O-])1)}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: inchi key=InChIKey=UFIVEPVSAGBUSI-REOHCLBHSA-M}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=(S)-dihydroorotate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=157.105    }}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: common name=dihydro-L-orotate|(S)-4,5-dihydroorotate|(S)-4,5-dihydroorotic acid|(S)-hydroorotic acid|(S)-di-H-orotate|L-dihydroorotate|4,5-dihydro-L-orotate|L-4,5-dihydroorotate|(S)-4-pyrimidinecarboxylic acid}}
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{{#set: consumed by=RXN0-6491|RXN0-6554|DIHYDROOROTATE-DEHYDROGENASE-RXN|RXN-9929}}
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{{#set: produced by=RXN0-6490}}
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{{#set: consumed or produced by=DIHYDROOROT-RXN}}
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Revision as of 17:48, 10 January 2018

Reaction 2.7.9.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • selenophosphate_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 selenide[c] + 1 ATP[c] => 1 selenophosphate[c] + 1 phosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-901, L-selenocysteine biosynthesis I (bacteria): PWY0-901
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






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