Difference between revisions of "CPD-2751"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...")
 
(Created page with "Category:Gene == Gene Tiso_gene_819 == * left end position: ** 24077 * transcription direction: ** POSITIVE * right end position: ** 25643 * centisome position: ** 84.2383...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] ==
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== Gene Tiso_gene_819 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 24077
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* common name:
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* transcription direction:
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** pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
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** 25643
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* centisome position:
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** 84.238335   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACSERLY-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 oxygen[c] '''+''' 1 pyridoxamine 5'-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-12726]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_1471]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[SULFOCYS-RXN]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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***ec-number
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** '''8''' reactions found over '''9''' reactions in the full pathway
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** experimental_annotation
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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***ec-number
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Pathways associated ==
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== Reconstruction information  ==
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* [[CYSTSYN-PWY]]
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* [[orthology]]:
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* [[PWY-6936]]
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=24077}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=25643}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
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{{#set: centisome position=84.238335    }}
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* UNIPROT:
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{{#set: reaction associated=ACSERLY-RXN|RXN-12726|SULFOCYS-RXN}}
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** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
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{{#set: pathway associated=CYSTSYN-PWY|PWY-6936}}
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** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
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** [http://www.uniprot.org/uniprot/P44909 P44909]
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** [http://www.uniprot.org/uniprot/P38075 P38075]
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** [http://www.uniprot.org/uniprot/P74211 P74211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxamine_5_-phosphate_oxidase-related_fmn-binding}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: gene associated=Tiso_gene_1471}}
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{{#set: in pathway=PWY-7204|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:48, 10 January 2018

Gene Tiso_gene_819

  • left end position:
    • 24077
  • transcription direction:
    • POSITIVE
  • right end position:
    • 25643
  • centisome position:
    • 84.238335
  • Synonym(s):

Reactions associated

  • ACSERLY-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-12726
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • SULFOCYS-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-2751&oldid=14736"