Difference between revisions of "RXN-7828"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** amidase * ec number: ** [http...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13297 RXN-13297] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13297 RXN-13297] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** amidase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
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** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[CPD-237]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[AMMONIUM]][c]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-10279]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CPD-14273]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 indole-3-acetamide[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 ammonium[c]
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** 1 H+[c] '''+''' 1 docosanoyl-CoA[c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 3-oxo-lignoceroyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_13682]]
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
** '''3''' reactions found over '''13''' reactions in the full pathway
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** '''16''' reactions found over '''16''' reactions in the full pathway
* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=amidase}}
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{{#set: ec number=EC-2.3.1.199}}
{{#set: ec number=EC-3.5.1.4}}
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{{#set: in pathway=PWY-7036}}
{{#set: gene associated=Tiso_gene_13682}}
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{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:48, 10 January 2018

Reaction RXN-13297

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 16 reactions found over 16 reactions in the full pathway

Reconstruction information

External links