Difference between revisions of "Aliphatic-L-Amino-Acids"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-aceto-2-h...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINE-NUCLEOSIDASE-RXN URIDINE-NUCLEOSIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINE-NUCLEOSIDASE-RXN URIDINE-NUCLEOSIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2-aceto-2-hydroxy-butyrate synthase
+
** inosine-uridine_preferring_nucleoside_hydrolase
−
** Acetolactate synthase catalytic subunit, mitochondrial
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.2.1.6 EC-2.2.1.6]
+
** [http://enzyme.expasy.org/EC/3.2.2.3 EC-3.2.2.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[2-OXOBUTANOATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[URACIL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 pyruvate[c] '''+''' 1 2-oxobutanoate[c] '''=>''' 1 CO2[c] '''+''' 1 (S)-2-aceto-2-hydroxybutanoate[c]
+
** 1 H2O[c] '''+''' 1 uridine[c] '''=>''' 1 D-ribofuranose[c] '''+''' 1 uracil[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11362]]
+
* [[Tiso_gene_9396]]
−
** EXPERIMENTAL_ANNOTATION
+
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
+
* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
+
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* [[orthology]]:
−
** [[primary_network]]
+
** [[pantograph]]:
 +
*** [[creinhardtii]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
+
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27654 27654]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15577 15577]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08648 R08648]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01080 R01080]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q59950 Q59950]
+
−
** [http://www.uniprot.org/uniprot/P42463 P42463]
+
−
** [http://www.uniprot.org/uniprot/Q8XAV3 Q8XAV3]
+
−
** [http://www.uniprot.org/uniprot/P27868 P27868]
+
−
** [http://www.uniprot.org/uniprot/P45260 P45260]
+
−
** [http://www.uniprot.org/uniprot/Q57625 Q57625]
+
−
** [http://www.uniprot.org/uniprot/P37251 P37251]
+
−
** [http://www.uniprot.org/uniprot/P45261 P45261]
+
−
** [http://www.uniprot.org/uniprot/O27493 O27493]
+
−
** [http://www.uniprot.org/uniprot/O66759 O66759]
+
−
** [http://www.uniprot.org/uniprot/Q9PHU2 Q9PHU2]
+
−
** [http://www.uniprot.org/uniprot/O05031 O05031]
+
−
** [http://www.uniprot.org/uniprot/Q57725 Q57725]
+
−
** [http://www.uniprot.org/uniprot/Q9PHU1 Q9PHU1]
+
−
** [http://www.uniprot.org/uniprot/Q9JTI1 Q9JTI1]
+
−
** [http://www.uniprot.org/uniprot/Q58077 Q58077]
+
−
** [http://www.uniprot.org/uniprot/O28554 O28554]
+
−
** [http://www.uniprot.org/uniprot/O53554 O53554]
+
−
** [http://www.uniprot.org/uniprot/Q04789 Q04789]
+
−
** [http://www.uniprot.org/uniprot/Q9JRF4 Q9JRF4]
+
−
** [http://www.uniprot.org/uniprot/Q59272 Q59272]
+
−
** [http://www.uniprot.org/uniprot/P27696 P27696]
+
−
** [http://www.uniprot.org/uniprot/Q59498 Q59498]
+
−
** [http://www.uniprot.org/uniprot/Q9RFQ7 Q9RFQ7]
+
−
** [http://www.uniprot.org/uniprot/Q05767 Q05767]
+
−
** [http://www.uniprot.org/uniprot/P40811 P40811]
+
−
** [http://www.uniprot.org/uniprot/P21622 P21622]
+
−
** [http://www.uniprot.org/uniprot/P27818 P27818]
+
−
** [http://www.uniprot.org/uniprot/Q41768 Q41768]
+
−
** [http://www.uniprot.org/uniprot/Q41769 Q41769]
+
−
** [http://www.uniprot.org/uniprot/P69684 P69684]
+
−
** [http://www.uniprot.org/uniprot/P27819 P27819]
+
−
** [http://www.uniprot.org/uniprot/Q9R586 Q9R586]
+
−
** [http://www.uniprot.org/uniprot/Q02137 Q02137]
+
−
** [http://www.uniprot.org/uniprot/Q02140 Q02140]
+
−
** [http://www.uniprot.org/uniprot/P36620 P36620]
+
−
** [http://www.uniprot.org/uniprot/Q42767 Q42767]
+
−
** [http://www.uniprot.org/uniprot/Q42768 Q42768]
+
−
** [http://www.uniprot.org/uniprot/Q49865 Q49865]
+
−
** [http://www.uniprot.org/uniprot/O22547 O22547]
+
−
** [http://www.uniprot.org/uniprot/O49229 O49229]
+
−
** [http://www.uniprot.org/uniprot/O22578 O22578]
+
−
** [http://www.uniprot.org/uniprot/O49210 O49210]
+
−
** [http://www.uniprot.org/uniprot/Q60021 Q60021]
+
−
** [http://www.uniprot.org/uniprot/P07342 P07342]
+
−
** [http://www.uniprot.org/uniprot/P00892 P00892]
+
−
** [http://www.uniprot.org/uniprot/P08142 P08142]
+
−
** [http://www.uniprot.org/uniprot/P0ADF8 P0ADF8]
+
−
** [http://www.uniprot.org/uniprot/P00894 P00894]
+
−
** [http://www.uniprot.org/uniprot/P00893 P00893]
+
−
** [http://www.uniprot.org/uniprot/P17597 P17597]
+
−
** [http://www.uniprot.org/uniprot/P09342 P09342]
+
−
** [http://www.uniprot.org/uniprot/P09114 P09114]
+
−
** [http://www.uniprot.org/uniprot/P14874 P14874]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-aceto-2-hydroxy-butyrate synthase}}
+
{{#set: common name=inosine-uridine_preferring_nucleoside_hydrolase}}
−
{{#set: common name=Acetolactate synthase catalytic subunit, mitochondrial}}
+
{{#set: ec number=EC-3.2.2.3}}
−
{{#set: ec number=EC-2.2.1.6}}
+
{{#set: gene associated=Tiso_gene_9396}}
−
{{#set: gene associated=Tiso_gene_11362}}
+
{{#set: in pathway=PWY-6556}}
−
{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction source=creinhardtii}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:49, 10 January 2018

Reaction URIDINE-NUCLEOSIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • inosine-uridine_preferring_nucleoside_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 uridine[c] => 1 D-ribofuranose[c] + 1 uracil[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6556, pyrimidine ribonucleosides salvage II: PWY-6556
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






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