Difference between revisions of "GLYOXII-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7032 CPD-7032] == * smiles: ** CC(CCO)C * inchi key: ** InChIKey=PHTQWCKDNZKARW-UHFFFAOYSA-...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7032 CPD-7032] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** CC(CCO)C
 +
* inchi key:
 +
** InChIKey=PHTQWCKDNZKARW-UHFFFAOYSA-N
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** 3-methylbutanol
−
** ORF
+
* molecular weight:
−
* ec number:
+
** 88.149   
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** isoamyl alcohol
 +
** isopentanol
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[NAD]][c] '''+''' 1 [[ISOBUTANOL]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7000]][c]
+
== Reaction(s) of unknown directionality ==
−
* With common name(s):
+
* [[RXN-7693]]
−
** 1 NAD+[c] '''+''' 1 isobutanol[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 isobutanal[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_5425]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5424]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6563]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7649]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6562]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
+
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* DRUGBANK : DB02296
−
{{#set: common name=polyketide_synthase}}
+
* PUBCHEM:
−
{{#set: common name=ORF}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=31260 31260]
−
{{#set: ec number=EC-1.1.1.1}}
+
* HMDB : HMDB06007
−
{{#set: gene associated=Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_6562}}
+
* LIGAND-CPD:
−
{{#set: in pathway=PWY-7396|PWY-7111|PWY-5057}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C07328 C07328]
−
{{#set: reconstruction category=annotation}}
+
* CHEMSPIDER:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.chemspider.com/Chemical-Structure.13500715.html 13500715]
−
{{#set: reconstruction source=in-silico_annotation}}
+
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15837 15837]
 +
{{#set: smiles=CC(CCO)C}}
 +
{{#set: inchi key=InChIKey=PHTQWCKDNZKARW-UHFFFAOYSA-N}}
 +
{{#set: common name=3-methylbutanol}}
 +
{{#set: molecular weight=88.149    }}
 +
{{#set: common name=isoamyl alcohol|isopentanol}}
 +
{{#set: consumed or produced by=RXN-7693}}

Revision as of 17:50, 10 January 2018

Metabolite CPD-7032

  • smiles:
    • CC(CCO)C
  • inchi key:
    • InChIKey=PHTQWCKDNZKARW-UHFFFAOYSA-N
  • common name:
    • 3-methylbutanol
  • molecular weight:
    • 88.149
  • Synonym(s):
    • isoamyl alcohol
    • isopentanol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLYOXII-RXN&oldid=14881"