Difference between revisions of "Tiso gene 1247"

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(Created page with "Category:Gene == Gene Tiso_gene_9051 == * left end position: ** 913 * transcription direction: ** POSITIVE * right end position: ** 3946 * centisome position: ** 9.449390...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13602 RXN-13602] == * direction: ** LEFT-TO-RIGHT * common name: ** linustatin β-diglucosi...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9051 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13602 RXN-13602] ==
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* left end position:
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* direction:
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** 913
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** linustatin β-diglucosidase
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* right end position:
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** beta-glucosidase-like_chloroplastic
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** 3946
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** ORF
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* centisome position:
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** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
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** 9.449390   
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** beta_glucosidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-14594]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[LINAMARIN]][c]
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***ec-number
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* With common name(s):
 +
** 1 linustatin[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 linamarin[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13306]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6187]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6497]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5836]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13305]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2843]]
 +
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6007]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8669]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10001]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_3467]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6188]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15067]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2344]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-7091]], linustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7091 PWY-7091]
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* [[UDPNACETYLGALSYN-PWY]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6749]]
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== Reconstruction information  ==
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* [[UDPNAGSYN-PWY]]
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* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=913}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=linustatin β-diglucosidase}}
−
{{#set: right end position=3946}}
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{{#set: common name=beta-glucosidase-like_chloroplastic}}
−
{{#set: centisome position=9.449390    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=L-GLN-FRUCT-6-P-AMINOTRANS-RXN}}
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{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
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{{#set: pathway associated=UDPNACETYLGALSYN-PWY|PWY-6749|UDPNAGSYN-PWY}}
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{{#set: common name=beta_glucosidase}}
 +
{{#set: ec number=EC-3.2.1.21}}
 +
{{#set: gene associated=Tiso_gene_13306|Tiso_gene_15066|Tiso_gene_6187|Tiso_gene_6497|Tiso_gene_5836|Tiso_gene_13305|Tiso_gene_2843|Tiso_gene_6007|Tiso_gene_8669|Tiso_gene_10001|Tiso_gene_3467|Tiso_gene_6188|Tiso_gene_15067|Tiso_gene_2344}}
 +
{{#set: in pathway=PWY-7091}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:50, 10 January 2018

Reaction RXN-13602

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • linustatin β-diglucosidase
    • beta-glucosidase-like_chloroplastic
    • ORF
    • low_quality_protein:_beta-glucosidase-like_chloroplastic-like
    • beta_glucosidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7091, linustatin bioactivation: PWY-7091
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1247&oldid=14889"