Difference between revisions of "PWY-5022"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1740 == * left end position: ** 13139 * transcription direction: ** POSITIVE * right end position: ** 13824 * centisome position: ** 59.779...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
+
== Gene Tiso_gene_1740 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 13139
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11]
+
** POSITIVE
 +
* right end position:
 +
** 13824
 +
* centisome position:
 +
** 59.779785   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[5.99.1.2-RXN]]
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-674]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[COUMARATE]][c] '''+''' 1 [[NADP]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 oxygen[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 trans-cinnamate[c] '''=>''' 1 H2O[c] '''+''' 1 4-coumarate[c] '''+''' 1 NADP+[c]
+
** [[pantograph]]-[[esiliculosus]]
−
 
+
== Pathways associated ==
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_1547]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_8263]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
== Pathways ==
+
−
* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
+
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=13139}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=13824}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
+
{{#set: centisome position=59.779785    }}
−
* UNIPROT:
+
{{#set: reaction associated=5.99.1.2-RXN}}
−
** [http://www.uniprot.org/uniprot/Q04468 Q04468]
+
−
** [http://www.uniprot.org/uniprot/P37115 P37115]
+
−
** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
+
−
** [http://www.uniprot.org/uniprot/P48522 P48522]
+
−
** [http://www.uniprot.org/uniprot/Q42895 Q42895]
+
−
** [http://www.uniprot.org/uniprot/O81928 O81928]
+
−
** [http://www.uniprot.org/uniprot/O24315 O24315]
+
−
** [http://www.uniprot.org/uniprot/Q43033 Q43033]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-1.14.13.11}}
+
−
{{#set: gene associated=Tiso_gene_1547|Tiso_gene_8263}}
+
−
{{#set: in pathway=PWY1F-467|PWY-1121}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana}}
+

Revision as of 16:41, 10 January 2018

Gene Tiso_gene_1740

  • left end position:
    • 13139
  • transcription direction:
    • POSITIVE
  • right end position:
    • 13824
  • centisome position:
    • 59.779785
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5022&oldid=10029"