Difference between revisions of "Tiso gene 18443"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** beta-glucosidase-like_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16176 == * Synonym(s): == Reactions associated == * DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN ** pantograph-esiliculosus * H2NEOPTE...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] ==
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== Gene Tiso_gene_16176 ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
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** ORF
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** beta-glucosidase-like_chloroplastic
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** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
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** beta_glucosidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
** 1 [[CPD-7417]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-7418]][c] '''+''' 1 [[Glucopyranose]][c]
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* With common name(s):
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** 1 cis-coumarinic acid-β-D-glucoside[c] '''+''' 1 H2O[c] '''=>''' 1 coumarinate[c] '''+''' 1 D-glucopyranose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6187]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13306]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2344]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3467]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10001]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_507]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_6188]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6497]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
* [[Tiso_gene_6007]]
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8669]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15067]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13305]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5836]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2843]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
== Pathways ==
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== Pathways associated ==
* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
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* [[PWY-7539]]
** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6797]]
== Reconstruction information  ==
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* [[PWY-6147]]
* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31223 31223]
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{{#set: pathway associated=PWY-7539|PWY-6797|PWY-6147}}
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04998 R04998]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=beta-glucosidase-like_chloroplastic}}
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{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
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{{#set: common name=beta_glucosidase}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: gene associated=Tiso_gene_6187|Tiso_gene_13306|Tiso_gene_2344|Tiso_gene_3467|Tiso_gene_15066|Tiso_gene_10001|Tiso_gene_507|Tiso_gene_6188|Tiso_gene_6497|Tiso_gene_6007|Tiso_gene_8669|Tiso_gene_15067|Tiso_gene_13305|Tiso_gene_5836|Tiso_gene_2843}}
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{{#set: in pathway=PWY-5176}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:54, 10 January 2018

Gene Tiso_gene_16176

  • Synonym(s):

Reactions associated

Pathways associated

External links