Difference between revisions of "Tiso gene 13588"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7745 RXN-7745] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7745 RXN-7745] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** arginyl-trna_synthetase
 
−
** arginine-trna_ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
+
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[ARG]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD-7066]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNAarg[c] '''+''' 1 L-arginine[c] '''=>''' 1 AMP[c] '''+''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 diphosphate[c]
+
** 1 (2R,3S)-3-methylmalate[c] '''+''' 1 NAD+[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 2-oxobutanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12997]]
+
* [[Tiso_gene_2920]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
−
***EC-NUMBER
+
** [[pantograph]]-[[synechocystis]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16360]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[esiliculosus]]
+
*** [[synechocystis]]
−
* [[annotation]]:
+
*** [[athaliana]]
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32718 32718]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00994 R00994]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P40329 P40329]
+
−
** [http://www.uniprot.org/uniprot/P35868 P35868]
+
−
** [http://www.uniprot.org/uniprot/P43832 P43832]
+
−
** [http://www.uniprot.org/uniprot/O51540 O51540]
+
−
** [http://www.uniprot.org/uniprot/O67068 O67068]
+
−
** [http://www.uniprot.org/uniprot/O59147 O59147]
+
−
** [http://www.uniprot.org/uniprot/O83803 O83803]
+
−
** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
+
−
** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
+
−
** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
+
−
** [http://www.uniprot.org/uniprot/P46906 P46906]
+
−
** [http://www.uniprot.org/uniprot/Q57689 Q57689]
+
−
** [http://www.uniprot.org/uniprot/O27496 O27496]
+
−
** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
+
−
** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
+
−
** [http://www.uniprot.org/uniprot/P56128 P56128]
+
−
** [http://www.uniprot.org/uniprot/P47618 P47618]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
+
−
** [http://www.uniprot.org/uniprot/Q08888 Q08888]
+
−
** [http://www.uniprot.org/uniprot/P54136 P54136]
+
−
** [http://www.uniprot.org/uniprot/P38714 P38714]
+
−
** [http://www.uniprot.org/uniprot/Q05506 Q05506]
+
−
** [http://www.uniprot.org/uniprot/P75222 P75222]
+
−
** [http://www.uniprot.org/uniprot/P11875 P11875]
+
−
** [http://www.uniprot.org/uniprot/O23247 O23247]
+
−
** [http://www.uniprot.org/uniprot/O74781 O74781]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=arginyl-trna_synthetase}}
+
{{#set: ec number=EC-1.1.1}}
−
{{#set: common name=arginine-trna_ligase}}
+
{{#set: gene associated=Tiso_gene_2920}}
−
{{#set: ec number=EC-6.1.1.19}}
+
{{#set: in pathway=PWY-5101}}
−
{{#set: gene associated=Tiso_gene_12997|Tiso_gene_16360}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=synechocystis|athaliana}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:56, 10 January 2018

Reaction RXN-7745

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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