Difference between revisions of "RFH"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19153 CPD-19153] == * smiles: ** CCCCCCC=CCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14107 RXN-14107] == * direction: ** LEFT-TO-RIGHT * common name: ** menaquinol-cytochrome c red...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19153 CPD-19153] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14107 RXN-14107] ==
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* smiles:
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* direction:
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** CCCCCCC=CCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VKLHSLOWDWGVGP-CGGPSVLLSA-J
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* common name:
 
* common name:
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** 3-oxo-(5Z)-dodecenoyl-CoA
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** menaquinol-cytochrome c reductase
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* molecular weight:
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** cytochrome_b6-fcomplexiron-sulfurchloroplastic
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** 957.775   
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** ubiquinol-cytochrome_c_reductase
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** probable_mitochondrial-processingpeptidasesubunitbeta
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* ec number:
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** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
 
* Synonym(s):
 
* Synonym(s):
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** 3-oxo-12:1-Δ5-CoA
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** menaquinone:cytochrome c reductase
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** 3-oxo-5-cis-dodecenoyl-CoA
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17799]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Menaquinols]][c] '''+''' 2 [[Cytochromes-C-Oxidized]][e] '''=>''' 1 [[Menaquinones]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 2 [[PROTON]][c]
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* [[RXN-17798]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a menaquinol[c] '''+''' 2 an oxidized c-type cytochrome[e] '''=>''' 1 a menaquinone[c] '''+''' 2 a reduced c-type cytochrome[e] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9627]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7235]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4973]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15926]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18330]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: smiles=CCCCCCC=CCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: inchi key=InChIKey=VKLHSLOWDWGVGP-CGGPSVLLSA-J}}
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{{#set: common name=menaquinol-cytochrome c reductase}}
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{{#set: common name=3-oxo-(5Z)-dodecenoyl-CoA}}
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{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
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{{#set: molecular weight=957.775    }}
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{{#set: common name=ubiquinol-cytochrome_c_reductase}}
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{{#set: common name=3-oxo-12:1-Δ5-CoA|3-oxo-5-cis-dodecenoyl-CoA}}
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{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
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{{#set: consumed by=RXN-17799}}
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{{#set: ec number=EC-1.10.2.2}}
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{{#set: produced by=RXN-17798}}
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{{#set: common name=menaquinone:cytochrome c reductase}}
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{{#set: gene associated=Tiso_gene_9627|Tiso_gene_7235|Tiso_gene_4973|Tiso_gene_15926|Tiso_gene_18330}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:56, 10 January 2018

Reaction RXN-14107

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • menaquinol-cytochrome c reductase
    • cytochrome_b6-fcomplexiron-sulfurchloroplastic
    • ubiquinol-cytochrome_c_reductase
    • probable_mitochondrial-processingpeptidasesubunitbeta
  • ec number:
  • Synonym(s):
    • menaquinone:cytochrome c reductase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RFH&oldid=15339"