|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-with-Uracils DNA-with-Uracils] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** riboflavin_kinase | + | ** a uracil in DNA |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** a DNA with uracil |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[RXN0-2584]] |
| − | ** 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 ATP[c] '''+''' 1 riboflavin[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 FMN[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_16837]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_7479]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | * [[Tiso_gene_1086]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
| + | |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
| + | |
| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a uracil in DNA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
| + | {{#set: common name=a DNA with uracil}} |
| − | * LIGAND-RXN:
| + | {{#set: consumed by=RXN0-2584}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q59263 Q59263]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=riboflavin_kinase}} | + | |
| − | {{#set: ec number=EC-2.7.1.26}}
| + | |
| − | {{#set: gene associated=Tiso_gene_16837|Tiso_gene_7479|Tiso_gene_1086}}
| + | |
| − | {{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
| + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}} | + | |
| − | {{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
