Difference between revisions of "UDPNACETYLMURAMATEDEHYDROG-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_2957 == * left end position: ** 16260 * transcription direction: ** POSITIVE * right end position: ** 17836 * centisome position: ** 90.706...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_2957 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] ==
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* left end position:
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* direction:
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** 16260
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** caffeate_o-methyltransferase
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* right end position:
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* ec number:
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** 17836
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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* centisome position:
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** 90.70624   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.1.1.145-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-676]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULIC-ACID]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12693]]
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** 1 trans-caffeate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 ferulate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-12747]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_18257]]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12789]]
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* [[Tiso_gene_18971]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***AUTOMATED-NAME-MATCH
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* [[RXN66-342]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
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***ec-number
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[RXN66-350]]
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** in-silico_annotation
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** '''9''' reactions found over '''19''' reactions in the full pathway
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***ec-number
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* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
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* [[RXN66-353]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-7186]], superpathway of scopolin and esculin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7186 PWY-7186]
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***ec-number
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** '''2''' reactions found over '''14''' reactions in the full pathway
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== Pathways associated ==
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== Reconstruction information  ==
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* [[PWY66-378]]
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* [[orthology]]:
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* [[PWY-7299]]
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** [[pantograph]]:
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* [[PWY-6948]]
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*** [[esiliculosus]]
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* [[PWY-6946]]
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* [[annotation]]:
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* [[PWY-6944]]
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=16260}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20225 20225]
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{{#set: right end position=17836}}
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* LIGAND-RXN:
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{{#set: centisome position=90.70624    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03366 R03366]
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{{#set: reaction associated=1.1.1.145-RXN|RXN-12693|RXN-12747|RXN-12789|RXN66-342|RXN66-350|RXN66-353}}
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* UNIPROT:
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{{#set: pathway associated=PWY66-378|PWY-7299|PWY-6948|PWY-6946|PWY-6944}}
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** [http://www.uniprot.org/uniprot/Q41086 Q41086]
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** [http://www.uniprot.org/uniprot/P28002 P28002]
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** [http://www.uniprot.org/uniprot/Q00763 Q00763]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=caffeate_o-methyltransferase}}
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{{#set: ec number=EC-2.1.1.68}}
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{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
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{{#set: in pathway=PWY-2181|PWY-1121|PWY-7498|PWY-7186}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:00, 10 January 2018

Reaction RXN-1104

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • caffeate_o-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2181, free phenylpropanoid acid biosynthesis: PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant): PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-7186, superpathway of scopolin and esculin biosynthesis: PWY-7186
    • 2 reactions found over 14 reactions in the full pathway

Reconstruction information

External links






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