Difference between revisions of "CPD-5166"

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(Created page with "Category:Gene == Gene Tiso_gene_15128 == * left end position: ** 14 * transcription direction: ** POSITIVE * right end position: ** 1853 * centisome position: ** 0.2683020...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10847 RXN-10847] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_15128 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10847 RXN-10847] ==
* left end position:
+
* direction:
** 14
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** ORF
* right end position:
+
* ec number:
** 1853
+
** [http://enzyme.expasy.org/EC/2.1.1.164 EC-2.1.1.164]
* centisome position:
+
** 0.26830205   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[R524-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-11756]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11752]][c]
***automated-name-match
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* With common name(s):
** experimental_annotation
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** 1 4'-O-demethylrebeccamycin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 rebeccamycin[c]
***automated-name-match
+
 
** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
* [[RXN-12893]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* [[Tiso_gene_7444]]
***automated-name-match
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** IN-SILICO_ANNOTATION
** experimental_annotation
+
***EC-NUMBER
***automated-name-match
+
** EXPERIMENTAL_ANNOTATION
== Pathways associated ==
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***EC-NUMBER
* [[CYANCAT-PWY]]
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== Pathways ==
 +
* [[PWY-6324]], rebeccamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6324 PWY-6324]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=14}}
+
* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27353 27353]
{{#set: right end position=1853}}
+
* LIGAND-RXN:
{{#set: centisome position=0.26830205    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R09569 R09569]
{{#set: reaction associated=R524-RXN|RXN-12893}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=CYANCAT-PWY}}
+
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-2.1.1.164}}
 +
{{#set: gene associated=Tiso_gene_7444}}
 +
{{#set: in pathway=PWY-6324}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:00, 10 January 2018

Reaction RXN-10847

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_7444
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-6324, rebeccamycin biosynthesis: PWY-6324
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links