Difference between revisions of "Tiso gene 6578"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8872 RXN-8872] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] == * direction: ** LEFT-TO-RIGHT * common name: ** violaxanthin de-epoxidase **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8872 RXN-8872] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
+
** violaxanthin de-epoxidase
 +
** violaxanthin_de-_chloroplast
 +
** violaxanthin_de-epoxidase
 
* Synonym(s):
 
* Synonym(s):
 +
** VDE
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[4-HYDROXYBENZALDEHYDE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-7616]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
+
** 1 [[ASCORBATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD1F-131]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-hydroxybenzaldehyde[c] '''+''' 1 oxygen[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''=>''' 1 H2O[c] '''+''' 1 3,4-dihydroxybenzaldehyde[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
+
** 1 L-ascorbate[c] '''+''' 1 H+[c] '''+''' 1 antheraxanthin[c] '''=>''' 1 zeaxanthin[c] '''+''' 1 H2O[c] '''+''' 1 L-dehydro-ascorbate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1035]]
+
* [[Tiso_gene_1275]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_16523]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5666]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5665]], vanillin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5665 PWY-5665]
+
* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7826]], Amaryllidacea alkaloids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7826 PWY-7826]
+
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21800 21800]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07179 R07179]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.14.1}}
+
{{#set: common name=violaxanthin de-epoxidase}}
−
{{#set: gene associated=Tiso_gene_1035}}
+
{{#set: common name=violaxanthin_de-_chloroplast}}
−
{{#set: in pathway=PWY-5665|PWY-7826}}
+
{{#set: common name=violaxanthin_de-epoxidase}}
 +
{{#set: common name=VDE}}
 +
{{#set: gene associated=Tiso_gene_1275|Tiso_gene_16523|Tiso_gene_5666}}
 +
{{#set: in pathway=PWY-5945}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 15:42, 10 January 2018

Reaction RXN-7985

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • violaxanthin de-epoxidase
    • violaxanthin_de-_chloroplast
    • violaxanthin_de-epoxidase
  • Synonym(s):
    • VDE

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5945, zeaxanthin, antheraxanthin and violaxanthin interconversion: PWY-5945
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6578&oldid=10123"