Difference between revisions of "Tiso gene 2159"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] == * direction: ** LEFT-TO-RIGHT * common name: ** cytidylate_kinase ** ump-cmp_...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14809 RXN-14809] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14809 RXN-14809] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* common name:
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** cytidylate_kinase
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** ump-cmp_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
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** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ATP]][c] '''+''' 1 [[DCMP]][c] '''=>''' 1 [[DCDP]][c] '''+''' 1 [[ADP]][c]
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** 1 [[L-arabinofuranose]][c] '''<=>''' 1 [[L-arabinopyranose]][c]
 
* With common name(s):
 
* With common name(s):
** 1 ATP[c] '''+''' 1 dCMP[c] '''=>''' 1 dCDP[c] '''+''' 1 ADP[c]
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**
 
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== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_2386]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_9739]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_14116]]
 
** [[pantograph]]-[[esiliculosus]]
 
* [[Tiso_gene_19734]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
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* [[PWY-5517]], L-arabinose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5517 PWY-5517]
** '''4''' reactions found over '''4''' reactions in the full pathway
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** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
 
** [[pantograph]]:
 
*** [[athaliana]]
 
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=REVERSIBLE}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25094 25094]
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{{#set: in pathway=PWY-5517|PWY-7295}}
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cytidylate_kinase}}
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{{#set: common name=ump-cmp_kinase}}
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{{#set: ec number=EC-2.7.4.25}}
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{{#set: ec number=EC-2.7.4.14}}
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{{#set: ec number=EC-2.7.4.13}}
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{{#set: gene associated=Tiso_gene_2386|Tiso_gene_9739|Tiso_gene_14116|Tiso_gene_19734}}
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{{#set: in pathway=PWY-7197}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:03, 10 January 2018

Reaction RXN-14809

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5517, L-arabinose degradation III: PWY-5517
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7295, L-arabinose degradation IV: PWY-7295
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links