Difference between revisions of "Tiso gene 19414"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] == * direction: ** REVERSIBLE * common name: ** carbonic_anhydrase ** gamma_ca...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** choline_e...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** carbonic_anhydrase
+
** choline_ethanolamine_kinase
−
** gamma_carbonic_anhydrase
+
−
** ORF
+
−
** beta-type_carbonic_anhydrase
+
−
** alpha_ca
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
+
** [http://enzyme.expasy.org/EC/2.7.1.32 EC-2.7.1.32]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[HCO3]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CHOLINE]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 hydrogencarbonate[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
+
** 1 ATP[c] '''+''' 1 choline[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7660]]
+
* [[Tiso_gene_16805]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18927]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_3056]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17511]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9852]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_19413]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1600]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19414]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_20230]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6150]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
+
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''16''' reactions in the full pathway
−
* [[PWYQT-4429]], CO2 fixation into oxaloacetate (anaplerotic): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4429 PWYQT-4429]
+
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7818 PWY-7818]
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
+
−
** '''8''' reactions found over '''14''' reactions in the full pathway
+
−
* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[esiliculosus]]
 
−
* [[manual]]:
 
−
** [[primary_network]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12837 12837]
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: common name=carbonic_anhydrase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
−
{{#set: common name=gamma_carbonic_anhydrase}}
+
* UNIPROT:
−
{{#set: common name=ORF}}
+
** [http://www.uniprot.org/uniprot/P20485 P20485]
−
{{#set: common name=beta-type_carbonic_anhydrase}}
+
** [http://www.uniprot.org/uniprot/Q01134 Q01134]
−
{{#set: common name=alpha_ca}}
+
** [http://www.uniprot.org/uniprot/Q42809 Q42809]
−
{{#set: ec number=EC-4.2.1.1}}
+
** [http://www.uniprot.org/uniprot/Q42810 Q42810]
−
{{#set: gene associated=Tiso_gene_7660|Tiso_gene_18927|Tiso_gene_3056|Tiso_gene_17511|Tiso_gene_9852|Tiso_gene_19413|Tiso_gene_1600|Tiso_gene_19414|Tiso_gene_20230|Tiso_gene_6150}}
+
** [http://www.uniprot.org/uniprot/Q42811 Q42811]
−
{{#set: in pathway=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=choline_ethanolamine_kinase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-2.7.1.32}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: gene associated=Tiso_gene_16805}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=PWY-7782|PWY3O-450|PWY-7818}}
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:03, 10 January 2018

Reaction CHOLINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • choline_ethanolamine_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7782, plasmalogen biosynthesis: PWY-7782
    • 7 reactions found over 16 reactions in the full pathway
  • PWY3O-450, phosphatidylcholine biosynthesis I: PWY3O-450
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7818, type IV lipoteichoic acid biosynthesis (S. pneumoniae): PWY-7818
    • 1 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19414&oldid=15881"