Difference between revisions of "CARNITINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9988 RXN-9988] == * direction: ** LEFT-TO-RIGHT * common name: ** n-acetylneuraminic_acid_phosp...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9988 RXN-9988] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ORF
+
** n-acetylneuraminic_acid_phosphate_synthase
** phenylalanine_trna_synthtetase
+
** alpha_subunit_of_phenylalanyl-trna_synthetase
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** ribosome_biogenesis_protein
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/6.1.1.20 EC-6.1.1.20]
+
** [http://enzyme.expasy.org/EC/2.5.1.57 EC-2.5.1.57]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ATP]][c] '''+''' 1 [[PHE-tRNAs]][c] '''+''' 1 [[PHE]][c] '''=>''' 1 [[Charged-PHE-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[N-ACETYL-D-MANNOSAMINE-6P]][c] '''=>''' 1 [[N-ACETYL-NEURAMINATE-9P]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 ATP[c] '''+''' 1 a tRNAphe[c] '''+''' 1 L-phenylalanine[c] '''=>''' 1 an L-phenylalanyl-[tRNAphe][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 phosphoenolpyruvate[c] '''+''' 1 H2O[c] '''+''' 1 N-acetyl-D-mannosamine 6-phosphate[c] '''=>''' 1 N-acetyl-β-neuraminate 9-phosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_1625]]
+
* [[Tiso_gene_15880]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4232]]
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** IN-SILICO_ANNOTATION
+
***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16650]]
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** IN-SILICO_ANNOTATION
+
***EC-NUMBER
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* [[Tiso_gene_16467]]
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** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-6138]], CMP-N-acetylneuraminate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6138 PWY-6138]
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
 
** [[pantograph]]:
 
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03660 R03660]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04435 R04435]
* UNIPROT:
+
** [http://www.uniprot.org/uniprot/P94283 P94283]
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** [http://www.uniprot.org/uniprot/Q9ZDB4 Q9ZDB4]
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** [http://www.uniprot.org/uniprot/Q9WZS9 Q9WZS9]
+
** [http://www.uniprot.org/uniprot/Q9PP34 Q9PP34]
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** [http://www.uniprot.org/uniprot/P56145 P56145]
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** [http://www.uniprot.org/uniprot/O67620 O67620]
+
** [http://www.uniprot.org/uniprot/O73984 O73984]
+
** [http://www.uniprot.org/uniprot/Q9Z6R6 Q9Z6R6]
+
** [http://www.uniprot.org/uniprot/Q58508 Q58508]
+
** [http://www.uniprot.org/uniprot/P56146 P56146]
+
** [http://www.uniprot.org/uniprot/O27545 O27545]
+
** [http://www.uniprot.org/uniprot/O26837 O26837]
+
** [http://www.uniprot.org/uniprot/O58391 O58391]
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** [http://www.uniprot.org/uniprot/O83938 O83938]
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** [http://www.uniprot.org/uniprot/P47436 P47436]
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** [http://www.uniprot.org/uniprot/O67087 O67087]
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** [http://www.uniprot.org/uniprot/O83059 O83059]
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** [http://www.uniprot.org/uniprot/O84843 O84843]
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** [http://www.uniprot.org/uniprot/Q9UYX3 Q9UYX3]
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** [http://www.uniprot.org/uniprot/Q9Z7W0 Q9Z7W0]
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** [http://www.uniprot.org/uniprot/Q9PJR8 Q9PJR8]
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** [http://www.uniprot.org/uniprot/P47437 P47437]
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** [http://www.uniprot.org/uniprot/Q9ZKF9 Q9ZKF9]
+
** [http://www.uniprot.org/uniprot/Q9UYX2 Q9UYX2]
+
** [http://www.uniprot.org/uniprot/Q9ZKF8 Q9ZKF8]
+
** [http://www.uniprot.org/uniprot/Q9JR76 Q9JR76]
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** [http://www.uniprot.org/uniprot/Q57911 Q57911]
+
** [http://www.uniprot.org/uniprot/P43819 P43819]
+
** [http://www.uniprot.org/uniprot/P94282 P94282]
+
** [http://www.uniprot.org/uniprot/O84481 O84481]
+
** [http://www.uniprot.org/uniprot/Q9ZDB5 Q9ZDB5]
+
** [http://www.uniprot.org/uniprot/Q9WZS8 Q9WZS8]
+
** [http://www.uniprot.org/uniprot/Q9RRX8 Q9RRX8]
+
** [http://www.uniprot.org/uniprot/Q9PP35 Q9PP35]
+
** [http://www.uniprot.org/uniprot/P43820 P43820]
+
** [http://www.uniprot.org/uniprot/Q46107 Q46107]
+
** [http://www.uniprot.org/uniprot/P15434 P15434]
+
** [http://www.uniprot.org/uniprot/Q5SGX1 Q5SGX1]
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** [http://www.uniprot.org/uniprot/P37984 P37984]
+
** [http://www.uniprot.org/uniprot/P51346 P51346]
+
** [http://www.uniprot.org/uniprot/P75563 P75563]
+
** [http://www.uniprot.org/uniprot/P75564 P75564]
+
** [http://www.uniprot.org/uniprot/Q55187 Q55187]
+
** [http://www.uniprot.org/uniprot/P95960 P95960]
+
** [http://www.uniprot.org/uniprot/P95961 P95961]
+
** [http://www.uniprot.org/uniprot/Q49032 Q49032]
+
** [http://www.uniprot.org/uniprot/P08312 P08312]
+
** [http://www.uniprot.org/uniprot/P07395 P07395]
+
** [http://www.uniprot.org/uniprot/O42870 O42870]
+
** [http://www.uniprot.org/uniprot/O13432 O13432]
+
** [http://www.uniprot.org/uniprot/Q9GYS8 Q9GYS8]
+
** [http://www.uniprot.org/uniprot/O42849 O42849]
+
** [http://www.uniprot.org/uniprot/P17921 P17921]
+
** [http://www.uniprot.org/uniprot/P17922 P17922]
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** [http://www.uniprot.org/uniprot/P15625 P15625]
+
** [http://www.uniprot.org/uniprot/P08425 P08425]
+
** [http://www.uniprot.org/uniprot/P15624 P15624]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ORF}}
+
{{#set: common name=n-acetylneuraminic_acid_phosphate_synthase}}
{{#set: common name=phenylalanine_trna_synthtetase}}
+
{{#set: ec number=EC-2.5.1.57}}
{{#set: common name=alpha_subunit_of_phenylalanyl-trna_synthetase}}
+
{{#set: gene associated=Tiso_gene_15880}}
{{#set: common name=ribosome_biogenesis_protein}}
+
{{#set: in pathway=PWY-6138}}
{{#set: ec number=EC-6.1.1.20}}
+
{{#set: gene associated=Tiso_gene_1625|Tiso_gene_4232|Tiso_gene_16650|Tiso_gene_16467}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:06, 10 January 2018

Reaction RXN-9988

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • n-acetylneuraminic_acid_phosphate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6138, CMP-N-acetylneuraminate biosynthesis I (eukaryotes): PWY-6138
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links