Difference between revisions of "CPD-12259"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10828 RXN-10828] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GGPS GGPS] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl diphosphate synthase *...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10828 RXN-10828] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GGPS GGPS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/2.7.8.23 EC-2.7.8.23]
+
** geranylgeranyl diphosphate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[PROTON]][c] '''+''' 1 [[CPD-11740]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-HYDROHYDROXYPHOSPHORYLPYRUVATE]][c]
+
** 1.0 [[FARNESYL-PP]][h] '''+''' 1.0 [[DELTA3-ISOPENTENYL-PP]][h] '''=>''' 1.0 [[GERANYLGERANYL-PP]][h] '''+''' 1.0 [[PPI]][h] '''+''' 1.0 [[PROTON]][h]
 
* With common name(s):
 
* With common name(s):
** 1 H+[c] '''+''' 1 carboxyphosphinopyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 phosphinopyruvate[c]
+
** 1.0 (2E,6E)-farnesyl diphosphate[h] '''+''' 1.0 isopentenyl diphosphate[h] '''=>''' 1.0 geranylgeranyl diphosphate[h] '''+''' 1.0 diphosphate[h] '''+''' 1.0 H+[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_2241]]
+
* [[Tiso_gene_2848]]
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_18201]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_16284]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6322]], phosphinothricin tripeptide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6322 PWY-6322]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
* [[PWY-7769]], phosalacine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7769 PWY-7769]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
*** [[esiliculosus]]
+
*** [[creinhardtii]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R08869 R08869]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-2.7.8.23}}
+
{{#set: common name=geranylgeranyl diphosphate synthase}}
{{#set: gene associated=Tiso_gene_2241}}
+
{{#set: gene associated=Tiso_gene_2848|Tiso_gene_18201|Tiso_gene_16284}}
{{#set: in pathway=PWY-6322|PWY-7769}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}

Revision as of 18:07, 10 January 2018

Reaction GGPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl diphosphate synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links