Difference between revisions of "Charged-CYS-tRNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_PROTON ExchangeSeed_PROTON] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A2-RXN PHOSPHOLIPASE-A2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_PROTON ExchangeSeed_PROTON] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A2-RXN PHOSPHOLIPASE-A2-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 +
** abhydrolase_domain-containing_protein_4-like
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[PROTON]][C-BOUNDARY] '''<=>''' 1.0 [[PROTON]][e]
+
** 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-Lysophosphatidylcholines]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[C-BOUNDARY] '''<=>''' 1.0 H+[e]
+
** 1 a phosphatidylcholine[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a 1-acyl-sn-glycero-3-phosphocholine[c] '''+''' 1 a long-chain fatty acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_15047]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15046]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12959]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12960]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6803]], phosphatidylcholine acyl editing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6803 PWY-6803]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* [[annotation]]:
−
** [[added to manage seeds from boundary to extracellular compartment]]
+
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15801 15801]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01313 R01313]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P04362 P04362]
 +
** [http://www.uniprot.org/uniprot/Q7M335 Q7M335]
 +
** [http://www.uniprot.org/uniprot/P14424 P14424]
 +
** [http://www.uniprot.org/uniprot/P14418 P14418]
 +
** [http://www.uniprot.org/uniprot/P19000 P19000]
 +
** [http://www.uniprot.org/uniprot/Q7M3E5 Q7M3E5]
 +
** [http://www.uniprot.org/uniprot/P14420 P14420]
 +
** [http://www.uniprot.org/uniprot/P20258 P20258]
 +
** [http://www.uniprot.org/uniprot/P14423 P14423]
 +
** [http://www.uniprot.org/uniprot/Q7LZG4 Q7LZG4]
 +
** [http://www.uniprot.org/uniprot/P20250 P20250]
 +
** [http://www.uniprot.org/uniprot/P21790 P21790]
 +
** [http://www.uniprot.org/uniprot/P21789 P21789]
 +
** [http://www.uniprot.org/uniprot/P81480 P81480]
 +
** [http://www.uniprot.org/uniprot/P47712 P47712]
 +
** [http://www.uniprot.org/uniprot/P20476 P20476]
 +
** [http://www.uniprot.org/uniprot/P24644 P24644]
 +
** [http://www.uniprot.org/uniprot/P81478 P81478]
 +
** [http://www.uniprot.org/uniprot/P06859 P06859]
 +
** [http://www.uniprot.org/uniprot/P39877 P39877]
 +
** [http://www.uniprot.org/uniprot/P48076 P48076]
 +
** [http://www.uniprot.org/uniprot/Q7M442 Q7M442]
 +
** [http://www.uniprot.org/uniprot/P18997 P18997]
 +
** [http://www.uniprot.org/uniprot/P20259 P20259]
 +
** [http://www.uniprot.org/uniprot/P20251 P20251]
 +
** [http://www.uniprot.org/uniprot/P21791 P21791]
 +
** [http://www.uniprot.org/uniprot/P81479 P81479]
 +
** [http://www.uniprot.org/uniprot/P51972 P51972]
 +
** [http://www.uniprot.org/uniprot/Q7M4I6 Q7M4I6]
 +
** [http://www.uniprot.org/uniprot/Q7M4I5 Q7M4I5]
 +
** [http://www.uniprot.org/uniprot/P14421 P14421]
 +
** [http://www.uniprot.org/uniprot/P20260 P20260]
 +
** [http://www.uniprot.org/uniprot/P20252 P20252]
 +
** [http://www.uniprot.org/uniprot/P21792 P21792]
 +
** [http://www.uniprot.org/uniprot/Q7LZQ5 Q7LZQ5]
 +
** [http://www.uniprot.org/uniprot/P20253 P20253]
 +
** [http://www.uniprot.org/uniprot/P20381 P20381]
 +
** [http://www.uniprot.org/uniprot/Q7LZQ7 Q7LZQ7]
 +
** [http://www.uniprot.org/uniprot/P20254 P20254]
 +
** [http://www.uniprot.org/uniprot/P20255 P20255]
 +
** [http://www.uniprot.org/uniprot/Q92147 Q92147]
 +
** [http://www.uniprot.org/uniprot/P20256 P20256]
 +
** [http://www.uniprot.org/uniprot/P20257 P20257]
 +
** [http://www.uniprot.org/uniprot/P47711 P47711]
 +
** [http://www.uniprot.org/uniprot/P31482 P31482]
 +
** [http://www.uniprot.org/uniprot/P62023 P62023]
 +
** [http://www.uniprot.org/uniprot/P11407 P11407]
 +
** [http://www.uniprot.org/uniprot/P18999 P18999]
 +
** [http://www.uniprot.org/uniprot/O42187 O42187]
 +
** [http://www.uniprot.org/uniprot/Q98996 Q98996]
 +
** [http://www.uniprot.org/uniprot/Q9NP80 Q9NP80]
 +
** [http://www.uniprot.org/uniprot/P14615 P14615]
 +
** [http://www.uniprot.org/uniprot/P25498 P25498]
 +
** [http://www.uniprot.org/uniprot/Q7M3V4 Q7M3V4]
 +
** [http://www.uniprot.org/uniprot/Q7M334 Q7M334]
 +
** [http://www.uniprot.org/uniprot/Q7M1V0 Q7M1V0]
 +
** [http://www.uniprot.org/uniprot/P24606 P24606]
 +
** [http://www.uniprot.org/uniprot/P04417 P04417]
 +
** [http://www.uniprot.org/uniprot/P00621 P00621]
 +
** [http://www.uniprot.org/uniprot/P00620 P00620]
 +
** [http://www.uniprot.org/uniprot/P00622 P00622]
 +
** [http://www.uniprot.org/uniprot/P00593 P00593]
 +
** [http://www.uniprot.org/uniprot/P06596 P06596]
 +
** [http://www.uniprot.org/uniprot/P00610 P00610]
 +
** [http://www.uniprot.org/uniprot/P16354 P16354]
 +
** [http://www.uniprot.org/uniprot/P00630 P00630]
 +
** [http://www.uniprot.org/uniprot/P00594 P00594]
 +
** [http://www.uniprot.org/uniprot/P04054 P04054]
 +
** [http://www.uniprot.org/uniprot/P14555 P14555]
 +
** [http://www.uniprot.org/uniprot/P00606 P00606]
 +
** [http://www.uniprot.org/uniprot/P00618 P00618]
 +
** [http://www.uniprot.org/uniprot/P17934 P17934]
 +
** [http://www.uniprot.org/uniprot/P00627 P00627]
 +
** [http://www.uniprot.org/uniprot/P00628 P00628]
 +
** [http://www.uniprot.org/uniprot/P00629 P00629]
 +
** [http://www.uniprot.org/uniprot/P00611 P00611]
 +
** [http://www.uniprot.org/uniprot/P00612 P00612]
 +
** [http://www.uniprot.org/uniprot/P00613 P00613]
 +
** [http://www.uniprot.org/uniprot/P00602 P00602]
 +
** [http://www.uniprot.org/uniprot/P00599 P00599]
 +
** [http://www.uniprot.org/uniprot/P00603 P00603]
 +
** [http://www.uniprot.org/uniprot/P00600 P00600]
 +
** [http://www.uniprot.org/uniprot/P00604 P00604]
 +
** [http://www.uniprot.org/uniprot/P00601 P00601]
 +
** [http://www.uniprot.org/uniprot/P00598 P00598]
 +
** [http://www.uniprot.org/uniprot/P00609 P00609]
 +
** [http://www.uniprot.org/uniprot/P00608 P00608]
 +
** [http://www.uniprot.org/uniprot/P00614 P00614]
 +
** [http://www.uniprot.org/uniprot/P00616 P00616]
 +
** [http://www.uniprot.org/uniprot/P00592 P00592]
 +
** [http://www.uniprot.org/uniprot/P04416 P04416]
 +
** [http://www.uniprot.org/uniprot/P00595 P00595]
 +
** [http://www.uniprot.org/uniprot/P00623 P00623]
 +
** [http://www.uniprot.org/uniprot/P00624 P00624]
 +
** [http://www.uniprot.org/uniprot/P24027 P24027]
 +
** [http://www.uniprot.org/uniprot/P62022 P62022]
 +
** [http://www.uniprot.org/uniprot/P04055 P04055]
 +
** [http://www.uniprot.org/uniprot/P04056 P04056]
 +
** [http://www.uniprot.org/uniprot/P04057 P04057]
 +
** [http://www.uniprot.org/uniprot/P00625 P00625]
 +
** [http://www.uniprot.org/uniprot/P06860 P06860]
 +
** [http://www.uniprot.org/uniprot/P00626 P00626]
 +
** [http://www.uniprot.org/uniprot/P14422 P14422]
 +
** [http://www.uniprot.org/uniprot/P07037 P07037]
 +
** [http://www.uniprot.org/uniprot/P10116 P10116]
 +
** [http://www.uniprot.org/uniprot/P08873 P08873]
 +
** [http://www.uniprot.org/uniprot/P08872 P08872]
 +
** [http://www.uniprot.org/uniprot/P14411 P14411]
 +
** [http://www.uniprot.org/uniprot/P15445 P15445]
 +
** [http://www.uniprot.org/uniprot/P20474 P20474]
 +
** [http://www.uniprot.org/uniprot/P24605 P24605]
 +
** [http://www.uniprot.org/uniprot/P22640 P22640]
 +
** [http://www.uniprot.org/uniprot/P24293 P24293]
 +
** [http://www.uniprot.org/uniprot/P24294 P24294]
 +
** [http://www.uniprot.org/uniprot/P34180 P34180]
 +
** [http://www.uniprot.org/uniprot/P80003 P80003]
 +
** [http://www.uniprot.org/uniprot/P31854 P31854]
 +
** [http://www.uniprot.org/uniprot/P43434 P43434]
 +
** [http://www.uniprot.org/uniprot/Q7LZG3 Q7LZG3]
 +
** [http://www.uniprot.org/uniprot/P43318 P43318]
 +
** [http://www.uniprot.org/uniprot/Q90W39 Q90W39]
 +
** [http://www.uniprot.org/uniprot/Q10754 Q10754]
 +
** [http://www.uniprot.org/uniprot/Q10755 Q10755]
 +
** [http://www.uniprot.org/uniprot/Q10756 Q10756]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
 +
{{#set: ec number=EC-3.1.1.4}}
 +
{{#set: gene associated=Tiso_gene_15047|Tiso_gene_15046|Tiso_gene_12959|Tiso_gene_12960}}
 +
{{#set: in pathway=PWY-6803|LIPASYN-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:08, 10 January 2018

Reaction PHOSPHOLIPASE-A2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • abhydrolase_domain-containing_protein_4-like
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6803, phosphatidylcholine acyl editing: PWY-6803
    • 3 reactions found over 4 reactions in the full pathway
  • LIPASYN-PWY, phospholipases: LIPASYN-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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