Difference between revisions of "TRNA-URACIL-5--METHYLTRANSFERASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_11329 == * Synonym(s): == Reactions associated == * 3.2.2.17-RXN ** pantograph-esiliculosus == Pathways associated == == Exter...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11329 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] ==
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* direction:
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** LEFT-TO-RIGHT
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.2.2.17-RXN]]
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* With identifiers:
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** 1 [[CPD-676]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CAFFEOYL-COA]][c]
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* With common name(s):
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** 1 trans-caffeate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 trans-caffeoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12275]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14183]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6673]], caffeoylglucarate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6673 PWY-6673]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=3.2.2.17-RXN}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-6.2.1.12}}
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{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
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{{#set: in pathway=PWY-1121|PWY-7398|PWY-6673}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}

Revision as of 17:11, 10 January 2018

Reaction RXN-1126

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-caffeate[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 diphosphate[c] + 1 AMP[c] + 1 trans-caffeoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis: PWY-6673
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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