Difference between revisions of "CPD-941"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_15142 == * left end position: ** 105 * transcription direction: ** POSITIVE * right end position: ** 1615 * centisome position: ** 2.016516...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] == * direction: ** LEFT-TO...")
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_15142 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] ==
* left end position:
+
* direction:
** 105
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
+
** [http://enzyme.expasy.org/EC/4.1.3.4 EC-4.1.3.4]
* right end position:
+
** 1615
+
* centisome position:
+
** 2.0165162   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[2.7.1.127-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[3-KETOBUTYRATE]][c]
***ec-number
+
* With common name(s):
== Pathways associated ==
+
** 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 acetoacetate[c]
* [[PWY-6364]]
+
 
* [[PWY-6362]]
+
== Genes associated with this reaction  ==
* [[PWY-6361]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3769]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5074]], mevalonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5074 PWY-5074]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=105}}
+
* RHEA:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24404 24404]
{{#set: right end position=1615}}
+
* LIGAND-RXN:
{{#set: centisome position=2.0165162    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360]
{{#set: reaction associated=2.7.1.127-RXN}}
+
* UNIPROT:
{{#set: pathway associated=PWY-6364|PWY-6362|PWY-6361}}
+
** [http://www.uniprot.org/uniprot/P35914 P35914]
 +
** [http://www.uniprot.org/uniprot/P35915 P35915]
 +
** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-4.1.3.4}}
 +
{{#set: gene associated=Tiso_gene_3769}}
 +
{{#set: in pathway=PWY66-367|LEU-DEG2-PWY|PWY-5074}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus|athaliana}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:11, 10 January 2018

Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-367, ketogenesis: PWY66-367
    • 5 reactions found over 5 reactions in the full pathway
  • LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5074, mevalonate degradation: PWY-5074
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links