Difference between revisions of "TPH"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14274 RXN-14274] == * direction: ** REVERSIBLE * common name: ** decanoyl-CoA C-acyltransferase...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5802 == * left end position: ** 137 * transcription direction: ** NEGATIVE * right end position: ** 1782 * centisome position: ** 0.629133...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14274 RXN-14274] ==
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== Gene Tiso_gene_5802 ==
* direction:
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* left end position:
** REVERSIBLE
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** 137
* common name:
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* transcription direction:
** decanoyl-CoA C-acyltransferase
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** NEGATIVE
** acetyl-_c-acetyltransferase
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* right end position:
** 3-ketoacyl-_thiolase
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** 1782
** thiolase
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* centisome position:
* ec number:
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** 0.629133   
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[PHOSMANMUT-RXN]]
** 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-10267]][c] '''<=>''' 1 [[CPD0-2105]][c] '''+''' 1 [[CO-A]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 acetyl-CoA[c] '''+''' 1 decanoyl-CoA[c] '''<=>''' 1 3-oxododecanoyl-CoA[c] '''+''' 1 coenzyme A[c]
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** experimental_annotation
 
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***ec-number
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16181]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
* [[Tiso_gene_3855]]
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** [[pantograph]]-[[creinhardtii]]
** IN-SILICO_ANNOTATION
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== Pathways associated ==
***EC-NUMBER
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* [[PWY-7456]]
** EXPERIMENTAL_ANNOTATION
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* [[PWY-5659]]
***EC-NUMBER
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* [[PWY-882]]
* [[Tiso_gene_15327]]
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* [[PWY-7586]]
** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: left end position=137}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31185 31185]
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{{#set: transcription direction=NEGATIVE}}
* LIGAND-RXN:
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{{#set: right end position=1782}}
** [http://www.genome.jp/dbget-bin/www_bget?R04742 R04742]
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{{#set: centisome position=0.629133    }}
{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=PHOSMANMUT-RXN}}
{{#set: common name=decanoyl-CoA C-acyltransferase}}
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{{#set: pathway associated=PWY-7456|PWY-5659|PWY-882|PWY-7586}}
{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: common name=thiolase}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: gene associated=Tiso_gene_10116|Tiso_gene_16181|Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_3856}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:12, 10 January 2018

Gene Tiso_gene_5802

  • left end position:
    • 137
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1782
  • centisome position:
    • 0.629133
  • Synonym(s):

Reactions associated

Pathways associated

External links