Difference between revisions of "RXN-8730"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17158 == * left end position: ** 182 * transcription direction: ** POSITIVE * right end position: ** 3425 * centisome position: ** 4.694351...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] ==
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== Gene Tiso_gene_17158 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 182
* common name:
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* transcription direction:
** 3-oxo-octanoyl-[acyl-carrier protein] synthase
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** POSITIVE
** 3-oxoacyl-synthase
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* right end position:
* ec number:
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** 3425
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* centisome position:
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** 4.694351   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[3.2.1.152-RXN]]
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c]
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** in-silico_annotation
* With common name(s):
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***automated-name-match
** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-octanoyl-[acp][c]
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== Pathways associated ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=182}}
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] synthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=3-oxoacyl-synthase}}
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{{#set: right end position=3425}}
{{#set: ec number=EC-2.3.1.41}}
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{{#set: centisome position=4.694351    }}
{{#set: gene associated=Tiso_gene_14485|Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_5939}}
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{{#set: reaction associated=3.2.1.152-RXN}}
{{#set: in pathway=PWY-5971}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:13, 10 January 2018

Gene Tiso_gene_17158

  • left end position:
    • 182
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3425
  • centisome position:
    • 4.694351
  • Synonym(s):

Reactions associated

Pathways associated

External links