Difference between revisions of "R524-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-GLUCOSAMINE-6-P D-GLUCOSAMINE-6-P] == * common name: ** D-glucosamine 6-phosphate * Synonym(s...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-deoxy-d-manno-octul...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-GLUCOSAMINE-6-P D-GLUCOSAMINE-6-P] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** D-glucosamine 6-phosphate
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** 3-deoxy-d-manno-octulosonic-acid_transferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.99.12 EC-2.4.99.12]
 
* Synonym(s):
 
* Synonym(s):
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** D-glucosamine phosphate
 
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** D-glucosamine 6-phosphate
 
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** D-glucosamine-6-P
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[GLUCOSAMINEPNACETYLTRANS-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CMP-KDO]][c] '''+''' 1 [[LIPID-IV-A]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[KDO-LIPID-IVA]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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** 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''+''' 1 lipid IVA[c] '''=>''' 1 CMP[c] '''+''' 1 α-Kdo-(2→6)-lipid IVA[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14462]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14463]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7675]], Kdo transfer to lipid IVA II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7675 PWY-7675]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=D-glucosamine 6-phosphate}}
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* RHEA:
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{{#set: common name=D-glucosamine phosphate|D-glucosamine 6-phosphate|D-glucosamine-6-P}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28066 28066]
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{{#set: consumed by=GLUCOSAMINEPNACETYLTRANS-RXN}}
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* LIGAND-RXN:
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{{#set: consumed or produced by=L-GLN-FRUCT-6-P-AMINOTRANS-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04658 R04658]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-deoxy-d-manno-octulosonic-acid_transferase}}
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{{#set: ec number=EC-2.4.99.12}}
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{{#set: gene associated=Tiso_gene_14462|Tiso_gene_14463}}
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{{#set: in pathway=KDOSYN-PWY|PWY-7675}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:14, 10 January 2018

Reaction KDOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-deoxy-d-manno-octulosonic-acid_transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CMP-3-deoxy-β-D-manno-octulosonate[c] + 1 lipid IVA[c] => 1 CMP[c] + 1 α-Kdo-(2→6)-lipid IVA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • KDOSYN-PWY, Kdo transfer to lipid IVA I: KDOSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7675, Kdo transfer to lipid IVA II: PWY-7675
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R524-RXN&oldid=16818"