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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] == | + | == Gene Tiso_gene_5483 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 8781 |
| − | * common name: | + | * transcription direction: |
| − | ** 1-phosphatidylinositol-4-phosphate_5-kinase | + | ** POSITIVE |
| − | ** ORF | + | * right end position: |
| − | ** phosphatidylinositol-4-phosphate_5-kinase | + | ** 13241 |
| − | ** phosphatidylinositol4phosphate5kinase | + | * centisome position: |
| − | * ec number:
| + | ** 65.72605 |
| − | ** [http://enzyme.expasy.org/EC/2.7.1.68 EC-2.7.1.68] | + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[ADENYLATECYC-RXN]] |
| − | ** 1 [[ATP]][c] '''+''' 1 [[CPD-1108]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***automated-name-match |
| − | ** 1 ATP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_9590]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_14055]]
| + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | * [[Tiso_gene_14966]] | + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_2021]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_7487]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_15721]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_1131]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_2008]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_18887]]
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_17887]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_9249]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_730]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_2350]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_15722]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_17532]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | * [[Tiso_gene_11381]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
| + | |
| − | ** '''3''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | * [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=8781}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14425 14425]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=13241}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03469 R03469]
| + | {{#set: centisome position=65.72605 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=ADENYLATECYC-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P48426 P48426]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q56YP2 Q56YP2]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=1-phosphatidylinositol-4-phosphate_5-kinase}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: common name=phosphatidylinositol-4-phosphate_5-kinase}} | + | |
| − | {{#set: common name=phosphatidylinositol4phosphate5kinase}}
| + | |
| − | {{#set: ec number=EC-2.7.1.68}}
| + | |
| − | {{#set: gene associated=Tiso_gene_9590|Tiso_gene_14055|Tiso_gene_14966|Tiso_gene_2021|Tiso_gene_7487|Tiso_gene_15721|Tiso_gene_1131|Tiso_gene_2008|Tiso_gene_18887|Tiso_gene_17887|Tiso_gene_9249|Tiso_gene_730|Tiso_gene_2350|Tiso_gene_15722|Tiso_gene_17532|Tiso_gene_11381}} | + | |
| − | {{#set: in pathway=PWY-6352|PWY-6351}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
