Difference between revisions of "Tiso gene 856"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] == * direction: ** REVERSIBLE * common name: ** isocitrate dehydrogenase (NADP+)...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6647 == * left end position: ** 3388 * transcription direction: ** NEGATIVE * right end position: ** 6591 * centisome position: ** 28.33486...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] ==
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== Gene Tiso_gene_6647 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 3388
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* common name:
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* transcription direction:
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** isocitrate dehydrogenase (NADP+)
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** NEGATIVE
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** ORF
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* right end position:
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** 6591
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* centisome position:
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** 28.334867   
 
* Synonym(s):
 
* Synonym(s):
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** oxalosuccinate decarboxylase
 
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** oxalsuccinic decarboxylase
 
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** isocitrate (NADP) dehydrogenase
 
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
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** NADP-specific isocitrate dehydrogenase
 
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** NADP-linked isocitrate dehydrogenase
 
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** NADP isocitric dehydrogenase
 
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** isocitrate dehydrogenase (NADP-dependent)
 
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** NADP-dependent isocitric dehydrogenase
 
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** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
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** NADP+-linked isocitrate dehydrogenase
 
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** IDH (ambiguous)
 
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** dual-cofactor-specific isocitrate dehydrogenase
 
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** NADP+-ICDH
 
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** NADP+-IDH
 
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** IDP
 
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** IDP1
 
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** IDP2
 
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** IDP3
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GLUTAMINESYN-RXN]]
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** 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 NADP+[c] '''+''' 1 D-threo-isocitrate[c] '''<=>''' 1 NADPH[c] '''+''' 1 oxalosuccinate[c] '''+''' 1 H+[c]
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== Pathways associated ==
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* [[GLNSYN-PWY]]
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== Genes associated with this reaction  ==
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* [[PWY-5675]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-381]]
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* [[Tiso_gene_10809]]
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* [[PWY-6549]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6964]]
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***EC-NUMBER
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* [[PWY490-3]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-6963]]
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***EC-NUMBER
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* [[Tiso_gene_18262]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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−
== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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−
* [[annotation]]:
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−
** [[pathwaytools]]:
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−
*** [[experimental_annotation]]
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−
*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3388}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25588 25588]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6591}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899]
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{{#set: centisome position=28.334867    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=GLUTAMINESYN-RXN}}
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{{#set: common name=isocitrate dehydrogenase (NADP+)}}
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{{#set: pathway associated=GLNSYN-PWY|PWY-5675|PWY-381|PWY-6549|PWY-6964|PWY490-3|PWY-6963}}
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{{#set: common name=ORF}}
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{{#set: common name=oxalosuccinate decarboxylase|oxalsuccinic decarboxylase|isocitrate (NADP) dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|NADP-specific isocitrate dehydrogenase|NADP-linked isocitrate dehydrogenase|NADP isocitric dehydrogenase|isocitrate dehydrogenase (NADP-dependent)|NADP-dependent isocitric dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|NADP+-linked isocitrate dehydrogenase|IDH (ambiguous)|dual-cofactor-specific isocitrate dehydrogenase|NADP+-ICDH|NADP+-IDH|IDP|IDP1|IDP2|IDP3}}
+
−
{{#set: gene associated=Tiso_gene_10809|Tiso_gene_18262}}
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−
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:20, 10 January 2018

Gene Tiso_gene_6647

  • left end position:
    • 3388
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6591
  • centisome position:
    • 28.334867
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_856&oldid=17340"