Difference between revisions of "CPD-11402"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACOA80or ACOA80or] == * direction: ** LEFT-TO-RIGHT * common name: ** Octanoyl-CoA:oxygen 2-oxidore...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] == * direction: ** LEFT-TO-RIGHT * common name: ** Magnesium chelatase, H subuni...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACOA80or ACOA80or] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Octanoyl-CoA:oxygen 2-oxidoreductase
+
** Magnesium chelatase, H subunit
 +
** h_subunit_of_mg_chelatase
 +
** magnesium_chelatase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.6.1.1 EC-6.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[FAD]][x] '''+''' 1.0 [[CPD-196]][x] '''=>''' 1.0 [[FADH2]][x] '''+''' 1.0 [[CPD0-2108]][x]
+
** 1 [[MG+2]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c] '''=>''' 1 [[Pi]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[MG-PROTOPORPHYRIN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 FAD[x] '''+''' 1.0 octanoyl-CoA[x] '''=>''' 1.0 FADH2[x] '''+''' 1.0 trans-oct-2-enoyl-CoA[x]
+
** 1 Mg2+[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 protoporphyrin IX[c] '''=>''' 1 phosphate[c] '''+''' 3 H+[c] '''+''' 1 ADP[c] '''+''' 1 Mg-protoporphyrin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8272]]
+
* [[Tiso_gene_5993]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_18566]]
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[creinhardtii]]
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_16674]]
+
* [[Tiso_gene_9870]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_17967]]
+
***EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11960]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
+
*** [[athaliana]]
 +
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13961 13961]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03877 R03877]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Octanoyl-CoA:oxygen 2-oxidoreductase}}
+
{{#set: common name=Magnesium chelatase, H subunit}}
−
{{#set: gene associated=Tiso_gene_8272|Tiso_gene_18566|Tiso_gene_16674|Tiso_gene_17967}}
+
{{#set: common name=h_subunit_of_mg_chelatase}}
−
{{#set: in pathway=}}
+
{{#set: common name=magnesium_chelatase}}
 +
{{#set: ec number=EC-6.6.1.1}}
 +
{{#set: gene associated=Tiso_gene_5993|Tiso_gene_9870|Tiso_gene_11960}}
 +
{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:21, 10 January 2018

Reaction RXN1F-20

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Magnesium chelatase, H subunit
    • h_subunit_of_mg_chelatase
    • magnesium_chelatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links








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