Difference between revisions of "Tiso gene 12326"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11667 RXN-11667] == * direction: ** REVERSIBLE * common name: ** (S)-3-hydroxybutanoyl-CoA dehy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRROLINEDEH-RXN HYDROXYPYRROLINEDEH-RXN] == * direction: ** REVERSIBLE * common name: ** py...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11667 RXN-11667] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRROLINEDEH-RXN HYDROXYPYRROLINEDEH-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** (S)-3-hydroxybutanoyl-CoA dehydrogenase
+
** pyrroline-hydroxy-carboxylate dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.150 EC-4.2.1.150]
+
** [http://enzyme.expasy.org/EC/1.5.1 EC-1.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-3-HYDROXYBUTANOYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CROTONYL-COA]][c]
+
** 2 [[WATER]][c] '''+''' 1 [[PYRROLINE-HYDROXY-CARBOXYLATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[L-ERYTHRO-4-HYDROXY-GLUTAMATE]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-3-hydroxybutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 crotonyl-CoA[c]
+
** 2 H2O[c] '''+''' 1 (3R,5S)-1-pyrroline-3-hydroxy-5-carboxylate[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 erythro-4-hydroxy-L-glutamate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5857]]
+
* [[Tiso_gene_9680]]
−
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_6952]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_886]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_3513]]
 +
** [[pantograph]]-[[synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
 
−
** '''4''' reactions found over '''11''' reactions in the full pathway
 
−
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[P3-PWY]], gallate degradation III (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P3-PWY P3-PWY]
 
−
** '''1''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
 
−
** '''5''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
 
−
** '''5''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 
−
** '''8''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[athaliana]]
+
*** [[synechocystis]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26558 26558]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03026 R03026]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04444 R04444]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=(S)-3-hydroxybutanoyl-CoA dehydrogenase}}
+
{{#set: common name=pyrroline-hydroxy-carboxylate dehydrogenase}}
−
{{#set: ec number=EC-4.2.1.150}}
+
{{#set: ec number=EC-1.5.1}}
−
{{#set: gene associated=Tiso_gene_5857}}
+
{{#set: gene associated=Tiso_gene_9680|Tiso_gene_6952|Tiso_gene_886|Tiso_gene_3513}}
−
{{#set: in pathway=P162-PWY|CENTFERM-PWY|PWY-5177|PWY-6583|PWY-6883|P3-PWY|PWY-7401|PWY-6863|PWY-5789}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana}}
+
{{#set: reconstruction source=synechocystis}}

Revision as of 17:22, 10 January 2018

Reaction HYDROXYPYRROLINEDEH-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • pyrroline-hydroxy-carboxylate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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