Difference between revisions of "CPD-182"

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(Created page with "Category:Gene == Gene Tiso_gene_1131 == * left end position: ** 21286 * transcription direction: ** NEGATIVE * right end position: ** 22185 * centisome position: ** 82.347...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-l...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_1131 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] ==
* left end position:
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* direction:
** 21286
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** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
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** ca2+-activated_spot-like_protein
* right end position:
+
* ec number:
** 22185
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** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2]
* centisome position:
+
** 82.34748   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[2.7.1.68-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[GUANOSINE-5DP-3DP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
***automated-name-match
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* With common name(s):
== Pathways associated ==
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** 1 ppGpp[c] '''+''' 1 H2O[c] '''=>''' 1 GDP[c] '''+''' 1 diphosphate[c] '''+''' 1 H+[c]
* [[PWY-6352]]
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* [[PWY-6351]]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_6799]]
 +
** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
== Pathways ==
 +
* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=21286}}
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* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253]
{{#set: right end position=22185}}
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* LIGAND-RXN:
{{#set: centisome position=82.34748    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00336 R00336]
{{#set: reaction associated=2.7.1.68-RXN}}
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* UNIPROT:
{{#set: pathway associated=PWY-6352|PWY-6351}}
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** [http://www.uniprot.org/uniprot/Q9PN26 Q9PN26]
 +
** [http://www.uniprot.org/uniprot/Q9JT97 Q9JT97]
 +
** [http://www.uniprot.org/uniprot/P43811 P43811]
 +
** [http://www.uniprot.org/uniprot/P0AG24 P0AG24]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ca2+-activated_spot-like_protein}}
 +
{{#set: ec number=EC-3.1.7.2}}
 +
{{#set: gene associated=Tiso_gene_6799}}
 +
{{#set: in pathway=PPGPPMET-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:24, 10 January 2018

Reaction PPGPPSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ca2+-activated_spot-like_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ppGpp[c] + 1 H2O[c] => 1 GDP[c] + 1 diphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links