Difference between revisions of "Apo-3-methylcrotonoyl-CoA-carbon-dioxide"

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(Created page with "Category:Gene == Gene Tiso_gene_596 == * left end position: ** 85 * transcription direction: ** POSITIVE * right end position: ** 5474 * centisome position: ** 0.27321526...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** saccharopine_dehydrogen...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_596 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] ==
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* left end position:
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* direction:
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** 85
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** saccharopine_dehydrogenase
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* right end position:
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* ec number:
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** 5474
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** [http://enzyme.expasy.org/EC/1.5.1.9 EC-1.5.1.9]
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* centisome position:
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** 0.27321526   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.7.1.90-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[SACCHAROPINE]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ALLYSINE]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 L-saccharopine[c] '''=>''' 1 NADH[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c] '''+''' 1 (S)-2-amino-6-oxohexanoate[c]
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***ec-number
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* [[6PFRUCTPHOS-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9366]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7039]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4160]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[Tiso_gene_10095]]
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* [[PWY-1042]]
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** IN-SILICO_ANNOTATION
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* [[GLYCOLYSIS]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-7385]]
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* [[Tiso_gene_1156]]
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* [[PWY-1861]]
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** [[pantograph]]-[[athaliana]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[Tiso_gene_7038]]
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* [[PWY-5484]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=85}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24520 24520]
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{{#set: right end position=5474}}
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* LIGAND-RXN:
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{{#set: centisome position=0.27321526    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
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{{#set: reaction associated=2.7.1.90-RXN|6PFRUCTPHOS-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-1042|GLYCOLYSIS|PWY-7385|PWY-1861|ANAGLYCOLYSIS-PWY|PWY-5484}}
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{{#set: common name=saccharopine_dehydrogenase}}
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{{#set: ec number=EC-1.5.1.9}}
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{{#set: gene associated=Tiso_gene_9366|Tiso_gene_7039|Tiso_gene_4160|Tiso_gene_10095|Tiso_gene_1156|Tiso_gene_7038}}
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{{#set: in pathway=LYSINE-DEG1-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:26, 10 January 2018

Reaction 1.5.1.9-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • saccharopine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 NAD+[c] + 1 L-saccharopine[c] => 1 NADH[c] + 1 L-glutamate[c] + 1 H+[c] + 1 (S)-2-amino-6-oxohexanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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