Difference between revisions of "RXN-13039"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_7660 == * left end position: ** 5377 * transcription direction: ** NEGATIVE * right end position: ** 6641 * centisome position: ** 49.19487...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_7660 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] ==
* left end position:
+
* direction:
** 5377
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/1.2.1.44 EC-1.2.1.44]
* right end position:
+
** 6641
+
* centisome position:
+
** 49.194874   
+
 
* Synonym(s):
 
* Synonym(s):
** CA
 
  
== Reactions associated ==
+
== Reaction Formula ==
* [[CARBODEHYDRAT-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FERULOYL-COA]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CONIFERYL-ALDEHYDE]][c] '''+''' 1 [[CO-A]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 feruloyl-CoA[c] '''=>''' 1 NADP+[c] '''+''' 1 coniferaldehyde[c] '''+''' 1 coenzyme A[c]
***ec-number
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_9504]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
** [[pantograph]]-[[creinhardtii]]
+
* [[Tiso_gene_11016]]
* [[RXN0-5224]]
+
** [[pantograph]]-[[athaliana]]
** in-silico_annotation
+
* [[Tiso_gene_15272]]
***ec-number
+
** experimental_annotation
+
***ec-number
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
== Pathways associated ==
+
== Pathways ==
* [[PWY-241]]
+
* [[PWY-6027]], capsiconiate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6027 PWY-6027]
* [[PWYQT-4429]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7117]]
+
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
* [[PWY-7115]]
+
** '''7''' reactions found over '''15''' reactions in the full pathway
* [[PWY-6142]]
+
== Reconstruction information  ==
* [[CYANCAT-PWY]]
+
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=5377}}
+
* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02193 R02193]
{{#set: right end position=6641}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=49.194874    }}
+
{{#set: ec number=EC-1.2.1.44}}
{{#set: common name=CA}}
+
{{#set: gene associated=Tiso_gene_9504|Tiso_gene_11016|Tiso_gene_15272}}
{{#set: reaction associated=CARBODEHYDRAT-RXN|RXN0-5224}}
+
{{#set: in pathway=PWY-6027|PWY-361}}
{{#set: pathway associated=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus|athaliana}}

Revision as of 17:27, 10 January 2018

Reaction RXN-1106

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6027, capsiconiate biosynthesis: PWY-6027
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway

Reconstruction information

External links