Difference between revisions of "Tiso gene 13653"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GTP GTP] == * smiles: ** C(OP([O-])(=O)OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-577 RXN66-577] == * direction: ** LEFT-TO-RIGHT * common name: ** sarcosine_dehydrogenase * e...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GTP GTP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-577 RXN66-577] ==
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* smiles:
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* direction:
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** C(OP([O-])(=O)OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=XKMLYUALXHKNFT-UUOKFMHZSA-J
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* common name:
 
* common name:
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** GTP
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** sarcosine_dehydrogenase
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* molecular weight:
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* ec number:
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** 519.151   
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** [http://enzyme.expasy.org/EC/1.5.8 EC-1.5.8]
 
* Synonym(s):
 
* Synonym(s):
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** guanylyl imidodiphosphate
 
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** guanosine 5'-triphosphate
 
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** guanosine-triphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14074]]
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* With identifiers:
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* [[GTP-CYCLOHYDRO-I-RXN]]
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** 1 [[SARCOSINE]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 2 [[ETF-Oxidized]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 2 [[ETF-Reduced]][c] '''+''' 1 [[GLY]][c]
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* [[RXN-14201]]
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* With common name(s):
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* [[RXN-11409]]
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** 1 sarcosine[c] '''+''' 3 H+[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 2 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 2 a reduced electron-transfer flavoprotein[c] '''+''' 1 glycine[c]
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* [[RXN-14140]]
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* [[GAMPG]]
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== Genes associated with this reaction  ==
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* [[RME256]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[NTDP]]
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* [[Tiso_gene_14788]]
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* [[RXN0-5462]]
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** IN-SILICO_ANNOTATION
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* [[RXN-8988]]
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***AUTOMATED-NAME-MATCH
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* [[GTPPYPHOSKIN-RXN]]
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== Pathways  ==
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* [[MRNA-GUANYLYLTRANSFERASE-RXN]]
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* [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1]
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* [[2.7.7.13-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-8340]]
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== Reconstruction information  ==
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* [[GTUP]]
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* [[annotation]]:
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* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
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** [[pathwaytools]]:
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* [[FE2GTPabc]]
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*** [[in-silico_annotation]]
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* [[GTPA]]
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* [[GTCY]]
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* [[GTP-CYCLOHYDRO-II-RXN]]
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== Reaction(s) known to produce the compound ==
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* [[GDPKIN-RXN]]
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* [[RXN0-6427]]
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* [[ATGD]]
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* [[GTPOP]]
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== Reaction(s) of unknown directionality ==
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* [[SUCL_gdp_m]]
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* [[RXN-14117]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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* [[URKI-RXN]]
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* [[GUANYLCYC-RXN]]
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== External links  ==
 
== External links  ==
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* CAS : 86-01-1
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC37565
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{{#set: common name=sarcosine_dehydrogenase}}
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* PUBCHEM:
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{{#set: ec number=EC-1.5.8}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058167 7058167]
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{{#set: gene associated=Tiso_gene_14788}}
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* HMDB : HMDB01273
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{{#set: in pathway=PWY-3661-1}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00044 C00044]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEMSPIDER:
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{{#set: reconstruction source=in-silico_annotation}}
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** [http://www.chemspider.com/Chemical-Structure.5414499.html 5414499]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=37565 37565]
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* BIGG : gtp
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{{#set: smiles=C(OP([O-])(=O)OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
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{{#set: inchi key=InChIKey=XKMLYUALXHKNFT-UUOKFMHZSA-J}}
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{{#set: common name=GTP}}
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{{#set: molecular weight=519.151    }}
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{{#set: common name=guanylyl imidodiphosphate|guanosine 5'-triphosphate|guanosine-triphosphate}}
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{{#set: consumed by=RXN-14074|GTP-CYCLOHYDRO-I-RXN|RXN-14201|RXN-11409|RXN-14140|GAMPG|RME256|NTDP|RXN0-5462|RXN-8988|GTPPYPHOSKIN-RXN|MRNA-GUANYLYLTRANSFERASE-RXN|2.7.7.13-RXN|RXN-8340|GTUP|ADENYLOSUCCINATE-SYNTHASE-RXN|FE2GTPabc|GTPA|GTCY|GTP-CYCLOHYDRO-II-RXN}}
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{{#set: produced by=GDPKIN-RXN|RXN0-6427|ATGD|GTPOP}}
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{{#set: consumed or produced by=SUCL_gdp_m|RXN-14117|SUCCINATE--COA-LIGASE-GDP-FORMING-RXN|URKI-RXN|GUANYLCYC-RXN}}
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Revision as of 17:27, 10 January 2018

Reaction RXN66-577

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sarcosine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 sarcosine[c] + 3 H+[c] + 1 a tetrahydrofolate[c] + 2 an oxidized electron-transfer flavoprotein[c] => 1 a 5,10-methenyltetrahydrofolate[c] + 2 a reduced electron-transfer flavoprotein[c] + 1 glycine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3661-1, glycine betaine degradation II (mammalian): PWY-3661-1
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13653&oldid=17903"