Difference between revisions of "RXN-17926"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9602 == * left end position: ** 3904 * transcription direction: ** POSITIVE * right end position: ** 5695 * centisome position: ** 42.45324...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] ==
+
== Gene Tiso_gene_9602 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 3904
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.7.7.24 EC-2.7.7.24]
+
** POSITIVE
 +
* right end position:
 +
** 5695
 +
* centisome position:
 +
** 42.45324   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[CITSYN-RXN]]
−
** 1 [[TTP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLC-1-P]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[DTDP-D-GLUCOSE]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 dTTP[c] '''+''' 1 H+[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''<=>''' 1 diphosphate[c] '''+''' 1 dTDP-&alpha;-D-glucose[c]
+
== Pathways associated ==
−
 
+
* [[PWY-5750]]
−
== Genes associated with this reaction  ==
+
* [[PWY-5913]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[GLYOXYLATE-BYPASS]]
−
* [[Tiso_gene_14704]]
+
* [[REDCITCYC]]
−
** [[pantograph]]-[[synechocystis]]
+
* [[TCA]]
−
== Pathways ==
+
* [[P105-PWY]]
−
* [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315]
+
* [[PWY-6969]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[FERMENTATION-PWY]]
−
* [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316]
+
* [[PWY-6728]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-6549]]
−
* [[PWY-7301]], dTDP-4-O-demethyl-&beta;-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
+
* [[PWY-7254]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7124]]
−
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814]
+
* [[PWY66-398]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-5690]]
−
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7312]], dTDP-D-&beta;-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104]
+
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6953]], dTDP-3-acetamido-&alpha;-D-fucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-7440]], dTDP-&beta;-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440]
+
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7657]], dTDP-&beta;-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808]
+
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7413]], dTDP-6-deoxy-&alpha;-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973]
+
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-7414]], dTDP-&alpha;-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3904}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=5695}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02328 R02328]
+
{{#set: centisome position=42.45324    }}
−
* UNIPROT:
+
{{#set: reaction associated=CITSYN-RXN}}
−
** [http://www.uniprot.org/uniprot/P55256 P55256]
+
{{#set: pathway associated=PWY-5750|PWY-5913|GLYOXYLATE-BYPASS|REDCITCYC|TCA|P105-PWY|PWY-6969|FERMENTATION-PWY|PWY-6728|PWY-6549|PWY-7254|PWY-7124|PWY66-398|PWY-5690}}
−
** [http://www.uniprot.org/uniprot/O27819 O27819]
+
−
** [http://www.uniprot.org/uniprot/Q58501 Q58501]
+
−
** [http://www.uniprot.org/uniprot/P37744 P37744]
+
−
** [http://www.uniprot.org/uniprot/P72017 P72017]
+
−
** [http://www.uniprot.org/uniprot/P61887 P61887]
+
−
** [http://www.uniprot.org/uniprot/P57040 P57040]
+
−
** [http://www.uniprot.org/uniprot/P26393 P26393]
+
−
** [http://www.uniprot.org/uniprot/P55254 P55254]
+
−
** [http://www.uniprot.org/uniprot/P55257 P55257]
+
−
** [http://www.uniprot.org/uniprot/P37779 P37779]
+
−
** [http://www.uniprot.org/uniprot/P37762 P37762]
+
−
** [http://www.uniprot.org/uniprot/Q54143 Q54143]
+
−
** [http://www.uniprot.org/uniprot/Q56174 Q56174]
+
−
** [http://www.uniprot.org/uniprot/Q51149 Q51149]
+
−
** [http://www.uniprot.org/uniprot/P55253 P55253]
+
−
** [http://www.uniprot.org/uniprot/O66250 O66250]
+
−
** [http://www.uniprot.org/uniprot/O08245 O08245]
+
−
** [http://www.uniprot.org/uniprot/Q9RR29 Q9RR29]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.7.7.24}}
+
−
{{#set: gene associated=Tiso_gene_14704}}
+
−
{{#set: in pathway=PWY-7315|PWY-7316|PWY-7301|PWY-7814|DTDPRHAMSYN-PWY|PWY-7312|PWY-7318|PWY-6942|PWY-7104|PWY-6953|PWY-7440|PWY-7657|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis}}
+

Revision as of 17:27, 10 January 2018

Gene Tiso_gene_9602

  • left end position:
    • 3904
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5695
  • centisome position:
    • 42.45324
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17926&oldid=17917"