Difference between revisions of "Charged-ILE-tRNAs"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-83 RXN66-83] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin_family_protein * ec...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10855 RXN-10855] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10855 RXN-10855] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** polyketide_synthase |
| − | + | ** ORF | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CPD-7682]][c] '''=>''' 1 [[CPD-468]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 NAD(P)+[c] '''+''' 2 H2O[c] '''+''' 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] '''=>''' 1 L-2-aminoadipate[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_6562]] |
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
| − | * [[ | + | * [[Tiso_gene_5425]] |
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_5424]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_16719]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | * [[Tiso_gene_6563]] | ||
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY66- | + | * [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425] |
| − | ** '''3''' reactions found over ''' | + | ** '''3''' reactions found over '''8''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* [[annotation]]: | * [[annotation]]: | ||
| Line 32: | Line 40: | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=polyketide_synthase}} |
| − | {{#set: | + | {{#set: common name=ORF}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_16719|Tiso_gene_6563}} |
| − | {{#set: in pathway=PWY66- | + | {{#set: in pathway=PWY66-425}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction source=in-silico_annotation}} | {{#set: reconstruction source=in-silico_annotation}} | ||
Revision as of 18:29, 10 January 2018
Contents
Reaction RXN-10855
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ORF
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NAD-P-OR-NOP[c] + 2 WATER[c] + 1 CPD-7682[c] => 1 CPD-468[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c]
- With common name(s):
- 1 NAD(P)+[c] + 2 H2O[c] + 1 (S)-2,3,4,5-tetrahydropiperidine-2-carboxylate[c] => 1 L-2-aminoadipate[c] + 1 NAD(P)H[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_6562
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_5425
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_5424
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_16719
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_6563
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY66-425, L-lysine degradation II (L-pipecolate pathway): PWY66-425
- 3 reactions found over 8 reactions in the full pathway
