Difference between revisions of "CPD-676"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYL-MALONYL-COA METHYL-MALONYL-COA] == * smiles: ** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYL-MALONYL-COA METHYL-MALONYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
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* smiles:
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* direction:
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** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I
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* common name:
 
* common name:
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** (R)-methylmalonyl-CoA
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** chloroplast_beta-keto_acyl_reductase
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* molecular weight:
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* ec number:
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** 862.568   
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** L-methylmalonyl-CoA
 
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** methylmalonyl-CoA
 
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** methyl-malonyl-coenzyme A
 
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** CH3-malonyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-14423]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14424]][c]
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* [[METHYLMALONYL-COA-MUT-RXN]]
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* With common name(s):
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** 1 H+[c] '''+''' 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13083]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9871]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01213 C01213]
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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* CHEBI:
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{{#set: ec number=EC-1.1.1.330}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57326 57326]
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083|Tiso_gene_9871}}
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* METABOLIGHTS : MTBLC57326
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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* PUBCHEM:
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{{#set: reconstruction category=orthology}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266560 45266560]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : mmcoa__R
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{{#set: reconstruction source=esiliculosus}}
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{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=(R)-methylmalonyl-CoA}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: molecular weight=862.568    }}
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{{#set: common name=L-methylmalonyl-CoA|methylmalonyl-CoA|methyl-malonyl-coenzyme A|CH3-malonyl-CoA}}
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{{#set: consumed or produced by=METHYLMALONYL-COA-MUT-RXN}}
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Revision as of 18:31, 10 January 2018

Reaction RXN-13443

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 3-oxo-docosapentaenoyl-CoA[c] + 1 NAD(P)H[c] => 1 NAD(P)+[c] + 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-676&oldid=18225"