Difference between revisions of "Tiso gene 19322"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBL...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17170 == * left end position: ** 2287 * transcription direction: ** NEGATIVE * right end position: ** 3627 * centisome position: ** 59.1108...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] ==
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== Gene Tiso_gene_17170 ==
* direction:
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* left end position:
** REVERSIBLE
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** 2287
* common name:
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* transcription direction:
** Ornithine--oxo-glutarate aminotransferase
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** NEGATIVE
* ec number:
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* right end position:
** [http://enzyme.expasy.org/EC/2.6.1.13 EC-2.6.1.13]
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** 3627
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* centisome position:
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** 59.110878   
 
* Synonym(s):
 
* Synonym(s):
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** FNR
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[1.18.1.2-RXN]]
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 2-oxoglutarate[c] '''+''' 1 L-ornithine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
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** experimental_annotation
 
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***ec-number
== Genes associated with this reaction  ==
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* [[RXN-17897]]
Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
* [[Tiso_gene_11231]]
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***ec-number
** [[pantograph]]-[[synechocystis]]
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** experimental_annotation
== Pathways  ==
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***ec-number
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
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== Pathways associated ==
** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7230]]
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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* [[PWY-101]]
** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: left end position=2287}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25160 25160]
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{{#set: transcription direction=NEGATIVE}}
* LIGAND-RXN:
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{{#set: right end position=3627}}
** [http://www.genome.jp/dbget-bin/www_bget?R00667 R00667]
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{{#set: centisome position=59.110878    }}
{{#set: direction=REVERSIBLE}}
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{{#set: common name=FNR}}
{{#set: common name=Ornithine--oxo-glutarate aminotransferase}}
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{{#set: reaction associated=1.18.1.2-RXN|RXN-17897}}
{{#set: ec number=EC-2.6.1.13}}
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{{#set: pathway associated=PWY-7230|PWY-101}}
{{#set: gene associated=Tiso_gene_11231}}
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{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|PWY-6344|PWY-3341|ARG-PRO-PWY|PWY-4981|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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Revision as of 17:31, 10 January 2018

Gene Tiso_gene_17170

  • left end position:
    • 2287
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3627
  • centisome position:
    • 59.110878
  • Synonym(s):
    • FNR

Reactions associated

  • 1.18.1.2-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-17897
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links