Difference between revisions of "Tiso gene 7285"

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(Created page with "Category:Gene == Gene Tiso_gene_4160 == * left end position: ** 3380 * transcription direction: ** POSITIVE * right end position: ** 6182 * centisome position: ** 22.06410...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11917 RXN-11917] == * direction: ** LEFT-TO-RIGHT * common name: ** 7-methyl-3-oxo-6-octenoyl-C...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4160 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11917 RXN-11917] ==
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* left end position:
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* direction:
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** 3380
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase
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* right end position:
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* ec number:
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** 6182
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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* centisome position:
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** 22.064104   
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* Synonym(s):
 
* Synonym(s):
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** 7-methyl-3-oxo-6-octenoyl-CoA thiolase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.5.1.9-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-12897]][c] '''=>''' 1 [[CPD-12902]][c] '''+''' 1 [[ACETYL-COA]][c]
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***automated-name-match
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* With common name(s):
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** 1 coenzyme A[c] '''+''' 1 7-methyl-3-oxooct-6-enoyl-CoA[c] '''=>''' 1 5-methylhex-4-enoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16181]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[LYSINE-DEG1-PWY]]
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* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3380}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08091 R08091]
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{{#set: right end position=6182}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=22.064104    }}
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{{#set: common name=7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase}}
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{{#set: reaction associated=1.5.1.9-RXN}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: pathway associated=LYSINE-DEG1-PWY}}
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{{#set: common name=7-methyl-3-oxo-6-octenoyl-CoA thiolase}}
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{{#set: gene associated=Tiso_gene_16181}}
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{{#set: in pathway=PWY-6672}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}

Revision as of 17:32, 10 January 2018

Reaction RXN-11917

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 7-methyl-3-oxo-6-octenoyl-CoA:acetyl-CoA C-acyltransferase
  • ec number:
  • Synonym(s):
    • 7-methyl-3-oxo-6-octenoyl-CoA thiolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 7-methyl-3-oxooct-6-enoyl-CoA[c] => 1 5-methylhex-4-enoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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