Difference between revisions of "5-HYDROXY-FERULIC-ACID"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.23-RXN 5.3.1.23-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6952 == * left end position: ** 2786 * transcription direction: ** POSITIVE * right end position: ** 5460 * centisome position: ** 23.90800...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.23-RXN 5.3.1.23-RXN] ==
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== Gene Tiso_gene_6952 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2786
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/5.3.1.23 EC-5.3.1.23]
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** POSITIVE
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* right end position:
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** 5460
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* centisome position:
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** 23.908007   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HYDROXYPYRROLINEDEH-RXN]]
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** 1 [[CPD-444]][c] '''=>''' 1 [[CPD-1063]][c]
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** [[pantograph]]-[[synechocystis]]
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* With common name(s):
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* [[PYRROLINECARBDEHYDROG-RXN]]
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** 1 S-methyl-5-thio-α-D-ribose 1-phosphate[c] '''=>''' 1 5-methylthioribulose 1-phosphate[c]
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** [[pantograph]]-[[synechocystis]]
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* [[RXN-14116]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18341]]
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** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_3805]]
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* [[SSNOm]]
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** [[pantograph]]-[[creinhardtii]]
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* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[creinhardtii]]
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* [[SUCCSEMIALDDEHYDROG-RXN]]
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-7174]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7174 PWY-7174]
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* [[ARGASEDEG-PWY]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6853]]
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* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361]
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* [[PWY-4321]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PROUT-PWY]]
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== Reconstruction information  ==
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* [[P181-PWY]]
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* [[orthology]]:
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* [[PWY-6993]]
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** [[pantograph]]:
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* [[P105-PWY]]
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*** [[synechocystis]]
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* [[PWY-6473]]
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* [[PWY-6535]]
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* [[GLUDEG-I-PWY]]
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]]
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* [[PWY-6537]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2786}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19989 19989]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5460}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04420 R04420]
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{{#set: centisome position=23.908007    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=HYDROXYPYRROLINEDEH-RXN|PYRROLINECARBDEHYDROG-RXN|RXN-14116|SSNOm|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN|SUCCSEMIALDDEHYDROG-RXN}}
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{{#set: ec number=EC-5.3.1.23}}
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{{#set: pathway associated=ARGASEDEG-PWY|PWY-6853|PWY-4321|PROUT-PWY|P181-PWY|PWY-6993|P105-PWY|PWY-6473|PWY-6535|GLUDEG-I-PWY|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6537}}
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{{#set: gene associated=Tiso_gene_18341|Tiso_gene_3805}}
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{{#set: in pathway=PWY-7174|PWY-4361}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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Revision as of 17:33, 10 January 2018

Gene Tiso_gene_6952

  • left end position:
    • 2786
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5460
  • centisome position:
    • 23.908007
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=5-HYDROXY-FERULIC-ACID&oldid=18331"