Difference between revisions of "RXN-9557"

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(Created page with "Category:Gene == Gene Tiso_gene_11124 == * left end position: ** 4312 * transcription direction: ** POSITIVE * right end position: ** 7883 * centisome position: ** 53.7186...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common name: ** Tiglyl...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_11124 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] ==
* left end position:
+
* direction:
** 4312
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** REVERSIBLE
* transcription direction:
+
* common name:
** POSITIVE
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** Tiglyl-CoA hydratase
* right end position:
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* ec number:
** 7883
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
* centisome position:
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** 53.718697   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[WATER]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA[c] '''<=>''' 1 (E)-2-methylcrotonoyl-CoA[c] '''+''' 1 H2O[c]
***ec-number
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 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_14257]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16145]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14262]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5857]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
== Pathways associated ==
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== Pathways ==
* [[TRNA-CHARGING-PWY]]
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* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4312}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31119 31119]
{{#set: right end position=7883}}
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* LIGAND-RXN:
{{#set: centisome position=53.718697    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04204 R04204]
{{#set: reaction associated=GLUTAMINE--TRNA-LIGASE-RXN}}
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{{#set: direction=REVERSIBLE}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: common name=Tiglyl-CoA hydratase}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Tiso_gene_14257|Tiso_gene_16145|Tiso_gene_14262|Tiso_gene_6885|Tiso_gene_5857}}
 +
{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=athaliana|esiliculosus}}

Revision as of 17:33, 10 January 2018

Reaction TIGLYLCOA-HYDROXY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Tiglyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5109, 2-methylbutanoate biosynthesis: PWY-5109
    • 2 reactions found over 6 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links