Difference between revisions of "CPD-14422"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13733 RXN-13733] == * direction: ** REVERSIBLE * common name: ** alkaline_dihydroceramidase * e...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin-1 * ec nu...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** exostosin-1 |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.4.1.225 EC-2.4.1.225] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 a | + | ** 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_6495]] |
| − | + | ||
| − | + | ||
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
| − | *** | + | ***EC-NUMBER |
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558] |
| − | ** ''' | + | ** '''3''' reactions found over '''13''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | |||
| − | |||
| − | |||
* [[annotation]]: | * [[annotation]]: | ||
** [[pathwaytools]]: | ** [[pathwaytools]]: | ||
*** [[in-silico_annotation]] | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * LIGAND-RXN: |
| − | {{#set: common name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07335 R07335] |
| − | {{#set: ec number=EC- | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: gene associated= | + | {{#set: common name=exostosin-1}} |
| − | {{#set: in pathway=PWY- | + | {{#set: ec number=EC-2.4.1.225}} |
| − | + | {{#set: gene associated=Tiso_gene_6495}} | |
| − | + | {{#set: in pathway=PWY-6558}} | |
| − | + | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction source=in-silico_annotation}} | {{#set: reconstruction source=in-silico_annotation}} | ||
Revision as of 18:33, 10 January 2018
Contents
Reaction 2.4.1.225-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- exostosin-1
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GlcNAc-GlcA-Gal-Gal-Xyl-Protein[c] + 1 UDP-GLUCURONATE[c] => 1 GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein[c] + 1 UDP[c] + 1 PROTON[c]
- With common name(s):
- 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] + 1 UDP-α-D-glucuronate[c] => 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] + 1 UDP[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_6495
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
- 3 reactions found over 13 reactions in the full pathway
Reconstruction information
External links
- LIGAND-RXN:
