Difference between revisions of "CPD-11665"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** L...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-hydroxyisobutyrate_mitochondrial
 
−
** 3-hydroxyisobutyrate_dehydrogenase
 
−
** uncharacterized_oxidoreductase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.31 EC-1.1.1.31]
+
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CPD-12175]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[HYPOXANTHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 (S)-3-hydroxy-isobutanoate[c] '''=>''' 1 NADH[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''+''' 1 H+[c]
+
** 1 NAD+[c] '''+''' 1 hypoxanthine[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19590]]
+
* [[Tiso_gene_11775]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_5857]]
+
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_19771]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_7107]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_19772]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_19592]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
+
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 +
** '''4''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
 
−
*** [[esiliculosus]]
 
 
*** [[athaliana]]
 
*** [[athaliana]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24670 24670]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01768 R01768]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P29266 P29266]
+
−
** [http://www.uniprot.org/uniprot/P28811 P28811]
+
−
** [http://www.uniprot.org/uniprot/Q8XAE4 Q8XAE4]
+
−
** [http://www.uniprot.org/uniprot/Q55702 Q55702]
+
−
** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-hydroxyisobutyrate_mitochondrial}}
+
{{#set: ec number=EC-1.17.1.4}}
−
{{#set: common name=3-hydroxyisobutyrate_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_11775}}
−
{{#set: common name=uncharacterized_oxidoreductase}}
+
{{#set: in pathway=P164-PWY|PWY-6596|SALVADEHYPOX-PWY}}
−
{{#set: ec number=EC-1.1.1.31}}
+
−
{{#set: gene associated=Tiso_gene_19590|Tiso_gene_5857|Tiso_gene_19771|Tiso_gene_7107|Tiso_gene_19772|Tiso_gene_19592}}
+
−
{{#set: in pathway=VALDEG-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
+
{{#set: reconstruction source=athaliana}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:33, 10 January 2018

Reaction RXN-7682

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 hypoxanthine[c] + 1 H2O[c] => 1 xanthine[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 8 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-11665&oldid=18351"