Difference between revisions of "ATIDm"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=APAPT APAPT] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethioninamine:putrescine...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13615 RXN-13615] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13615 RXN-13615] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** acyl-coenzyme_a_oxidase |
+ | ** ORF | ||
+ | ** acyl-CoA_dehydrogenase | ||
+ | ** acyl-_dehydrogenase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 | + | ** 1 [[CPD-10267]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 decanoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[Tiso_gene_17967]] |
− | ** [[ | + | ** IN-SILICO_ANNOTATION |
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_883]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_5991]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_18566]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_6475]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_16631]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[ | + | * [[annotation]]: |
− | ** [[ | + | ** [[pathwaytools]]: |
− | *** [[ | + | *** [[experimental_annotation]] |
+ | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28355 28355] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=acyl-coenzyme_a_oxidase}} |
− | {{#set: gene associated= | + | {{#set: common name=ORF}} |
− | {{#set: in pathway=}} | + | {{#set: common name=acyl-CoA_dehydrogenase}} |
− | {{#set: reconstruction category= | + | {{#set: common name=acyl-_dehydrogenase}} |
− | {{#set: reconstruction tool= | + | {{#set: ec number=EC-1.3.8.7}} |
− | {{#set: reconstruction source= | + | {{#set: gene associated=Tiso_gene_17967|Tiso_gene_883|Tiso_gene_5991|Tiso_gene_18566|Tiso_gene_6475|Tiso_gene_16631}} |
+ | {{#set: in pathway=PWY-7094}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} |
Revision as of 17:33, 10 January 2018
Contents
Reaction RXN-13615
- direction:
- LEFT-TO-RIGHT
- common name:
- acyl-coenzyme_a_oxidase
- ORF
- acyl-CoA_dehydrogenase
- acyl-_dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-10267[c] + 1 PROTON[c] + 1 ETF-Oxidized[c] => 1 T2-DECENOYL-COA[c] + 1 ETF-Reduced[c]
- With common name(s):
- 1 decanoyl-CoA[c] + 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] => 1 trans-dec-2-enoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_17967
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_883
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_5991
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_18566
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_6475
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_16631
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
Reconstruction information
External links
- RHEA: