Difference between revisions of "DIMP"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_1942 == * Synonym(s): == Reactions associated == * 2.7.13.3-RXN ** pantograph-esiliculosus == Pathways associated == == Extern...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** methionyl-trna_synthetase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
+ | ** 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''=>''' 1 [[Charged-MET-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] | ||
+ | * With common name(s): | ||
+ | ** 1 ATP[c] '''+''' 1 L-methionine[c] '''+''' 1 elongator tRNAmet[c] '''=>''' 1 an L-methionyl-[elongator tRNAmet][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_406]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_284]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
− | == Pathways | + | == Pathways == |
+ | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | ||
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * [[orthology]]: | ||
+ | ** [[pantograph]]: | ||
+ | *** [[esiliculosus]] | ||
+ | * [[annotation]]: | ||
+ | ** [[pathwaytools]]: | ||
+ | *** [[experimental_annotation]] | ||
+ | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13481 13481] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P56127 P56127] | ||
+ | ** [http://www.uniprot.org/uniprot/Q44951 Q44951] | ||
+ | ** [http://www.uniprot.org/uniprot/P47267 P47267] | ||
+ | ** [http://www.uniprot.org/uniprot/O84035 O84035] | ||
+ | ** [http://www.uniprot.org/uniprot/O28819 O28819] | ||
+ | ** [http://www.uniprot.org/uniprot/O58721 O58721] | ||
+ | ** [http://www.uniprot.org/uniprot/O83776 O83776] | ||
+ | ** [http://www.uniprot.org/uniprot/O33925 O33925] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58659 Q58659] | ||
+ | ** [http://www.uniprot.org/uniprot/O66738 O66738] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85] | ||
+ | ** [http://www.uniprot.org/uniprot/O26687 O26687] | ||
+ | ** [http://www.uniprot.org/uniprot/O67298 O67298] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0] | ||
+ | ** [http://www.uniprot.org/uniprot/P43828 P43828] | ||
+ | ** [http://www.uniprot.org/uniprot/P56192 P56192] | ||
+ | ** [http://www.uniprot.org/uniprot/Q50319 Q50319] | ||
+ | ** [http://www.uniprot.org/uniprot/P23920 P23920] | ||
+ | ** [http://www.uniprot.org/uniprot/P75091 P75091] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55729 Q55729] | ||
+ | ** [http://www.uniprot.org/uniprot/P22438 P22438] | ||
+ | ** [http://www.uniprot.org/uniprot/P00958 P00958] | ||
+ | ** [http://www.uniprot.org/uniprot/P00959 P00959] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9] | ||
+ | ** [http://www.uniprot.org/uniprot/O23761 O23761] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=methionyl-trna_synthetase}} | ||
+ | {{#set: ec number=EC-6.1.1.10}} | ||
+ | {{#set: gene associated=Tiso_gene_406|Tiso_gene_284}} | ||
+ | {{#set: in pathway=TRNA-CHARGING-PWY}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction source=esiliculosus}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} |
Revision as of 17:34, 10 January 2018
Contents
Reaction METHIONINE--TRNA-LIGASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- methionyl-trna_synthetase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 MET[c] + 1 Elongation-tRNAMet[c] => 1 Charged-MET-tRNAs[c] + 1 AMP[c] + 1 PPI[c]
- With common name(s):
- 1 ATP[c] + 1 L-methionine[c] + 1 elongator tRNAmet[c] => 1 an L-methionyl-[elongator tRNAmet][c] + 1 AMP[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_406
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_284
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: