Difference between revisions of "ATAMm"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDC orDC] == * direction: ** LEFT-TO-RIGHT * common name: ** ornithine decarboxylase * Synonym(s):...")
 
(Created page with "Category:Gene == Gene Tiso_gene_15991 == * left end position: ** 622 * transcription direction: ** NEGATIVE * right end position: ** 2366 * centisome position: ** 13.34477...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDC orDC] ==
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== Gene Tiso_gene_15991 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 622
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* common name:
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* transcription direction:
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** ornithine decarboxylase
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** NEGATIVE
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* right end position:
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** 2366
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* centisome position:
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** 13.344775   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[2.3.1.180-RXN]]
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** 1.0 [[PROTON]][c] '''+''' 1.0 [[L-ORNITHINE]][c] '''=>''' 1.0 [[PUTRESCINE]][c] '''+''' 1.0 [[CARBON-DIOXIDE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1.0 H+[c] '''+''' 1.0 L-ornithine[c] '''=>''' 1.0 putrescine[c] '''+''' 1.0 CO2[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[2.3.1.41-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10737]]
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* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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** [[pantograph]]-[[athaliana]]
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== Reconstruction information  ==
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** [[pantograph]]-[[synechocystis]]
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* [[orthology]]:
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]:
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* [[3-OXOACYL-ACP-SYNTH-RXN]]
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*** [[creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* [[ACP-S-ACETYLTRANSFER-RXN]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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* [[RXN-10059]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-10654]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-10658]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-11474]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-11479]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9516]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9523]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9527]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9531]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9535]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9539]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9632]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9648]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9650]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9651]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9652]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9653]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-9654]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-1003]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-132]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-138]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-218]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-236]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-26]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-306]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-324]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-368]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-445]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-460]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-499]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN1G-840]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN3O-1803]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-7388]]
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* [[PWY-5971]]
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* [[PWY-6282]]
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* [[PWY-5965]]
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* [[PWY-5989]]
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* [[PWY-5966]]
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* [[PWYG-321]]
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* [[FASYN-INITIAL-PWY]]
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* [[PWY-5994]]
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* [[PWY3O-355]]
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* [[PWY-4381]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=622}}
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{{#set: common name=ornithine decarboxylase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Tiso_gene_10737}}
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{{#set: right end position=2366}}
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{{#set: in pathway=}}
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{{#set: centisome position=13.344775    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=2.3.1.180-RXN|2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|ACP-S-ACETYLTRANSFER-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN1G-1003|RXN1G-132|RXN1G-138|RXN1G-218|RXN1G-236|RXN1G-26|RXN1G-306|RXN1G-324|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN1G-840|RXN3O-1803}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-5994|PWY3O-355|PWY-4381}}
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{{#set: reconstruction source=creinhardtii}}
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Revision as of 17:35, 10 January 2018

Gene Tiso_gene_15991

  • left end position:
    • 622
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2366
  • centisome position:
    • 13.344775
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ATAMm&oldid=18512"