Difference between revisions of "CPD-464"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-478 RXN66-478] == * direction: ** LEFT-TO-RIGHT * common name: ** phytol dehydrogenase ** pol...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9650 RXN-9650] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-478 RXN66-478] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9650 RXN-9650] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phytol dehydrogenase
 
 
** polyketide_synthase
 
** polyketide_synthase
−
** ORF
+
** 3-oxoacyl-synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[PHYTOL]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-14926]][c]
+
** 1 [[MALONYL-COA]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 phytol[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 phytenal[c]
+
** 1 malonyl-CoA[c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6563]]
+
* [[Tiso_gene_5939]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_5425]]
+
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10876]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_136]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_7649]]
+
* [[Tiso_gene_15991]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_19302]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_135]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_5424]]
+
* [[Tiso_gene_13394]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_6562]]
+
* [[Tiso_gene_14485]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_500]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phytol dehydrogenase}}
 
 
{{#set: common name=polyketide_synthase}}
 
{{#set: common name=polyketide_synthase}}
−
{{#set: common name=ORF}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: ec number=EC-1.1.1.1}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: gene associated=Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_6562}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: in pathway=PWY66-389}}
+
{{#set: ec number=EC-2.3.1.41}}
 +
{{#set: gene associated=Tiso_gene_5939|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_14485|Tiso_gene_500}}
 +
{{#set: in pathway=PWY-5994}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:35, 10 January 2018

Reaction RXN-9650

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-464&oldid=18582"