Difference between revisions of "Tiso gene 16879"

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(Created page with "Category:Gene == Gene Tiso_gene_2447 == * left end position: ** 8 * transcription direction: ** POSITIVE * right end position: ** 4580 * centisome position: ** 4.122648800...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_2447 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] ==
* left end position:
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* direction:
** 8
+
** REVERSIBLE
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
* right end position:
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** 4580
+
* centisome position:
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** 4.122648800e-2
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ATPASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c]
***ec-number
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* With common name(s):
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 1 (3S)-hydroxyadipyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 trans-2,3-dehydroadipyl-coA[c]
** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
* [[RXN-12195]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* [[Tiso_gene_5857]]
***ec-number
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** [[pantograph]]-[[athaliana]]
* [[RXN-12196]]
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** [[pantograph]]-[[esiliculosus]]
** in-silico_annotation
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* [[Tiso_gene_14257]]
***ec-number
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** [[pantograph]]-[[esiliculosus]]
* [[RXN0-5462]]
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== Pathways  ==
** in-silico_annotation
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* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
***ec-number
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** '''2''' reactions found over '''7''' reactions in the full pathway
== Pathways associated ==
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* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
* [[PWY-7210]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
* [[PWY-7198]]
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== Reconstruction information  ==
* [[PWY-6545]]
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* [[orthology]]:
* [[PWY-7184]]
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** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=8}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
{{#set: right end position=4580}}
+
* LIGAND-RXN:
{{#set: centisome position=4.122648800e-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: direction=REVERSIBLE}}
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
+
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14257}}
 +
{{#set: in pathway=PWY-1361|PWY0-321}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus|athaliana}}

Revision as of 17:36, 10 January 2018

Reaction RXN-2425

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1361, benzoyl-CoA degradation I (aerobic): PWY-1361
    • 2 reactions found over 7 reactions in the full pathway
  • PWY0-321, phenylacetate degradation I (aerobic): PWY0-321
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links